Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-BQ31612 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HLA-BQ31612 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.17■□□□□ 0.98
HLA-BQ31612 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HLA-BQ31612 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-BQ31612 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.16■□□□□ 0.98
HLA-BQ31612 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-BQ31612 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HLA-BQ31612 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-BQ31612 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-BQ31612 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-BQ31612 AC055733.4-201ENST00000638462 1354 ntBASIC21.16■□□□□ 0.98
HLA-BQ31612 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-BQ31612 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HLA-BQ31612 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.16■□□□□ 0.98
HLA-BQ31612 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.16■□□□□ 0.98
HLA-BQ31612 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HLA-BQ31612 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
HLA-BQ31612 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-BQ31612 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-BQ31612 DUSP8P5-201ENST00000422884 1815 ntBASIC21.15■□□□□ 0.98
HLA-BQ31612 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
HLA-BQ31612 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-BQ31612 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.15■□□□□ 0.98
HLA-BQ31612 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
HLA-BQ31612 AC069152.1-201ENST00000438030 544 ntBASIC21.15■□□□□ 0.98
HLA-BQ31612 CNN2P6-201ENST00000439038 900 ntBASIC21.15■□□□□ 0.98
HLA-BQ31612 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
HLA-BQ31612 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.15■□□□□ 0.98
HLA-BQ31612 AC105036.2-201ENST00000569468 176 ntBASIC21.15■□□□□ 0.98
HLA-BQ31612 MIR4651-201ENST00000582622 73 ntBASIC21.15■□□□□ 0.98
HLA-BQ31612 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-BQ31612 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-BQ31612 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HLA-BQ31612 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-BQ31612 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-BQ31612 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-BQ31612 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-BQ31612 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.14■□□□□ 0.97
HLA-BQ31612 AC133041.1-202ENST00000642053 222 ntBASIC21.14■□□□□ 0.97
HLA-BQ31612 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.14■□□□□ 0.97
HLA-BQ31612 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-BQ31612 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
HLA-BQ31612 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-BQ31612 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
HLA-BQ31612 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
HLA-BQ31612 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-BQ31612 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-BQ31612 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-BQ31612 AC133552.2-202ENST00000575694 574 ntBASIC21.13■□□□□ 0.97
HLA-BQ31612 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HLA-BQ31612 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-BQ31612 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-BQ31612 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-BQ31612 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
HLA-BQ31612 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
HLA-BQ31612 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-BQ31612 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.12■□□□□ 0.97
HLA-BQ31612 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-BQ31612 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-BQ31612 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-BQ31612 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-BQ31612 FAM201B-201ENST00000458407 597 ntBASIC21.12■□□□□ 0.97
HLA-BQ31612 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-BQ31612 AC010536.3-201ENST00000620306 533 ntBASIC21.12■□□□□ 0.97
HLA-BQ31612 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
HLA-BQ31612 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-BQ31612 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-BQ31612 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-BQ31612 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-BQ31612 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HLA-BQ31612 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.11■□□□□ 0.97
HLA-BQ31612 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-BQ31612 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.11■□□□□ 0.97
HLA-BQ31612 AC073210.2-201ENST00000430369 194 ntBASIC21.11■□□□□ 0.97
HLA-BQ31612 AC010141.2-201ENST00000452426 721 ntBASIC21.11■□□□□ 0.97
HLA-BQ31612 KRT18P20-201ENST00000548986 1279 ntBASIC21.11■□□□□ 0.97
HLA-BQ31612 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-BQ31612 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HLA-BQ31612 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HLA-BQ31612 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.1■□□□□ 0.97
HLA-BQ31612 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HLA-BQ31612 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.1■□□□□ 0.97
HLA-BQ31612 AC079089.2-201ENST00000531211 1277 ntBASIC21.1■□□□□ 0.97
HLA-BQ31612 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.1■□□□□ 0.97
HLA-BQ31612 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-BQ31612 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-BQ31612 AC138907.5-202ENST00000569484 235 ntBASIC21.1■□□□□ 0.97
HLA-BQ31612 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.1■□□□□ 0.97
HLA-BQ31612 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HLA-BQ31612 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-BQ31612 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-BQ31612 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.1■□□□□ 0.97
HLA-BQ31612 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
HLA-BQ31612 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-BQ31612 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
HLA-BQ31612 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-BQ31612 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-BQ31612 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.09■□□□□ 0.97
HLA-BQ31612 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms