Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 RPL19AYBR084C-A 570 nt5.87□□□□□ -1.47
CAF120P53836 ESC8YOL017W 2145 nt5.86□□□□□ -1.47
CAF120P53836 MPP10YJR002W 1782 nt5.86□□□□□ -1.47
CAF120P53836 DSE1YER124C 1722 nt5.86□□□□□ -1.47
CAF120P53836 GAS2YLR343W 1668 nt5.86□□□□□ -1.47
CAF120P53836 RPN4YDL020C 1596 nt5.86□□□□□ -1.47
CAF120P53836 UBC9YDL064W 474 nt5.86□□□□□ -1.47
CAF120P53836 MRPL7YDR237W 879 nt5.86□□□□□ -1.47
CAF120P53836 VMA8YEL051W 771 nt5.86□□□□□ -1.47
CAF120P53836 YNL035CYNL035C 1170 nt5.86□□□□□ -1.47
CAF120P53836 GGA1YDR358W 1674 nt5.85□□□□□ -1.47
CAF120P53836 THP1YOL072W 1368 nt5.85□□□□□ -1.47
CAF120P53836 ISC10YER180C 804 nt5.85□□□□□ -1.47
CAF120P53836 tR(ACG)JtR(ACG)J 73 nt5.85□□□□□ -1.47
CAF120P53836 CIA2YHR122W 696 nt5.85□□□□□ -1.47
CAF120P53836 YIL029CYIL029C 429 nt5.85□□□□□ -1.47
CAF120P53836 BCY1YIL033C 1251 nt5.85□□□□□ -1.47
CAF120P53836 UIP3YAR027W 708 nt5.85□□□□□ -1.47
CAF120P53836 TSA1YML028W 591 nt5.85□□□□□ -1.47
CAF120P53836 YMR046W-AYMR046W-A 129 nt5.85□□□□□ -1.47
CAF120P53836 STP22YCL008C 1158 nt5.85□□□□□ -1.47
CAF120P53836 MIC60YKR016W 1623 nt5.85□□□□□ -1.47
CAF120P53836 SUB2YDL084W 1341 nt5.84□□□□□ -1.47
CAF120P53836 YEL068CYEL068C 333 nt5.84□□□□□ -1.47
CAF120P53836 CGR1YGL029W 363 nt5.84□□□□□ -1.47
CAF120P53836 GRE3YHR104W 984 nt5.84□□□□□ -1.47
CAF120P53836 YHR214WYHR214W 612 nt5.84□□□□□ -1.47
CAF120P53836 YAR066WYAR066W 612 nt5.84□□□□□ -1.47
CAF120P53836 YNL181WYNL181W 1224 nt5.84□□□□□ -1.47
CAF120P53836 YGK3YOL128C 1128 nt5.84□□□□□ -1.47
CAF120P53836 CKA2YOR061W 1020 nt5.84□□□□□ -1.47
CAF120P53836 snR17asnR17a 333 nt5.84□□□□□ -1.47
CAF120P53836 ATG5YPL149W 885 nt5.84□□□□□ -1.47
CAF120P53836 MNN5YJL186W 1761 nt5.84□□□□□ -1.47
CAF120P53836 ATG1YGL180W 2694 nt5.84□□□□□ -1.47
CAF120P53836 CNE1YAL058W 1509 nt5.84□□□□□ -1.48
CAF120P53836 KKQ8YKL168C 2175 nt5.83□□□□□ -1.48
CAF120P53836 TEL2YGR099W 2067 nt5.83□□□□□ -1.48
CAF120P53836 TBF1YPL128C 1689 nt5.83□□□□□ -1.48
CAF120P53836 PRE9YGR135W 777 nt5.83□□□□□ -1.48
CAF120P53836 tR(ACG)DtR(ACG)D 73 nt5.83□□□□□ -1.48
CAF120P53836 tR(ACG)EtR(ACG)E 73 nt5.83□□□□□ -1.48
CAF120P53836 tR(ACG)KtR(ACG)K 73 nt5.83□□□□□ -1.48
CAF120P53836 tR(ACG)LtR(ACG)L 73 nt5.83□□□□□ -1.48
CAF120P53836 tR(ACG)OtR(ACG)O 73 nt5.83□□□□□ -1.48
CAF120P53836 YKL151CYKL151C 1014 nt5.83□□□□□ -1.48
CAF120P53836 YMR304C-AYMR304C-A 351 nt5.83□□□□□ -1.48
CAF120P53836 ASI2YNL159C 870 nt5.83□□□□□ -1.48
CAF120P53836 YBR056W-AYBR056W-A 201 nt5.83□□□□□ -1.48
CAF120P53836 GLN1YPR035W 1113 nt5.83□□□□□ -1.48
CAF120P53836 GCR2YNL199C 1605 nt5.83□□□□□ -1.48
CAF120P53836 GIP1YBR045C 1920 nt5.83□□□□□ -1.48
CAF120P53836 ERC1YHR032W 1746 nt5.82□□□□□ -1.48
CAF120P53836 ACF2YLR144C 2340 nt5.82□□□□□ -1.48
CAF120P53836 AAP1YHR047C 2571 nt5.82□□□□□ -1.48
CAF120P53836 MET32YDR253C 576 nt5.82□□□□□ -1.48
CAF120P53836 LRP1YHR081W 555 nt5.82□□□□□ -1.48
CAF120P53836 YIL046W-AYIL046W-A 165 nt5.82□□□□□ -1.48
CAF120P53836 MRPL31YKL138C 396 nt5.82□□□□□ -1.48
CAF120P53836 MRPL20YKR085C 588 nt5.82□□□□□ -1.48
CAF120P53836 DCS1YLR270W 1053 nt5.82□□□□□ -1.48
CAF120P53836 YMR254CYMR254C 309 nt5.82□□□□□ -1.48
CAF120P53836 YNL019CYNL019C 855 nt5.82□□□□□ -1.48
CAF120P53836 YNL033WYNL033W 855 nt5.82□□□□□ -1.48
CAF120P53836 YNL089CYNL089C 477 nt5.82□□□□□ -1.48
CAF120P53836 YOR277CYOR277C 309 nt5.82□□□□□ -1.48
CAF120P53836 GRE1YPL223C 507 nt5.82□□□□□ -1.48
CAF120P53836 YBR124WYBR124W 360 nt5.82□□□□□ -1.48
CAF120P53836 HOF1YMR032W 2010 nt5.81□□□□□ -1.48
CAF120P53836 YCR075W-AYCR075W-A 228 nt5.81□□□□□ -1.48
CAF120P53836 UBC13YDR092W 462 nt5.81□□□□□ -1.48
CAF120P53836 PDX1YGR193C 1233 nt5.81□□□□□ -1.48
CAF120P53836 CAP2YIL034C 864 nt5.81□□□□□ -1.48
CAF120P53836 YAP5YIR018W 738 nt5.81□□□□□ -1.48
CAF120P53836 ENT3YJR125C 1227 nt5.81□□□□□ -1.48
CAF120P53836 YAL056C-AYAL056C-A 351 nt5.81□□□□□ -1.48
CAF120P53836 YMR086C-AYMR086C-A 339 nt5.81□□□□□ -1.48
CAF120P53836 YOR082CYOR082C 342 nt5.81□□□□□ -1.48
CAF120P53836 YPR114WYPR114W 948 nt5.81□□□□□ -1.48
CAF120P53836 HRR25YPL204W 1485 nt5.81□□□□□ -1.48
CAF120P53836 SDA1YGR245C 2304 nt5.81□□□□□ -1.48
CAF120P53836 PDH1YPR002W 1551 nt5.8□□□□□ -1.48
CAF120P53836 FRS2YFL022C 1512 nt5.8□□□□□ -1.48
CAF120P53836 RPS16BYDL083C 432 nt5.8□□□□□ -1.48
CAF120P53836 RGI1YER067W 486 nt5.8□□□□□ -1.48
CAF120P53836 FAR7YFR008W 666 nt5.8□□□□□ -1.48
CAF120P53836 YLR466C-BYLR466C-B 117 nt5.8□□□□□ -1.48
CAF120P53836 PHO80YOL001W 882 nt5.8□□□□□ -1.48
CAF120P53836 TPK2YPL203W 1143 nt5.8□□□□□ -1.48
CAF120P53836 CRZ1YNL027W 2037 nt5.8□□□□□ -1.48
CAF120P53836 CLA4YNL298W 2529 nt5.8□□□□□ -1.48
CAF120P53836 YGL036WYGL036W 2730 nt5.79□□□□□ -1.48
CAF120P53836 UGA2YBR006W 1494 nt5.79□□□□□ -1.48
CAF120P53836 YML020WYML020W 1995 nt5.79□□□□□ -1.48
CAF120P53836 snR80snR80 171 nt5.79□□□□□ -1.48
CAF120P53836 YDR406W-AYDR406W-A 246 nt5.79□□□□□ -1.48
CAF120P53836 YDR524C-AYDR524C-A 120 nt5.79□□□□□ -1.48
CAF120P53836 VAM7YGL212W 951 nt5.79□□□□□ -1.48
CAF120P53836 SLX9YGR081C 633 nt5.79□□□□□ -1.48
CAF120P53836 NSL1YPL233W 651 nt5.79□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms