Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 OCT1YKL134C 2319 nt2.38□□□□□ -2.03
VPS55P47111 RPC37YKR025W 849 nt2.38□□□□□ -2.03
VPS55P47111 OXR1YPL196W 822 nt2.38□□□□□ -2.03
VPS55P47111 ARO4YBR249C 1113 nt2.38□□□□□ -2.03
VPS55P47111 EPL1YFL024C 2499 nt2.37□□□□□ -2.03
VPS55P47111 CLB4YLR210W 1383 nt2.37□□□□□ -2.03
VPS55P47111 YDR442WYDR442W 393 nt2.37□□□□□ -2.03
VPS55P47111 PFA5YDR459C 1125 nt2.37□□□□□ -2.03
VPS55P47111 APA2YDR530C 978 nt2.37□□□□□ -2.03
VPS55P47111 YFL051CYFL051C 483 nt2.37□□□□□ -2.03
VPS55P47111 CAT5YOR125C 702 nt2.37□□□□□ -2.03
VPS55P47111 CHS2YBR038W 2892 nt2.37□□□□□ -2.03
VPS55P47111 MIF2YKL089W 1650 nt2.37□□□□□ -2.03
VPS55P47111 NDT80YHR124W 1884 nt2.37□□□□□ -2.03
VPS55P47111 TFB2YPL122C 1542 nt2.37□□□□□ -2.03
VPS55P47111 FAA2YER015W 2235 nt2.36□□□□□ -2.03
VPS55P47111 GCD14YJL125C 1152 nt2.36□□□□□ -2.03
VPS55P47111 RPL15AYLR029C 615 nt2.36□□□□□ -2.03
VPS55P47111 RPL20BYOR312C 519 nt2.36□□□□□ -2.03
VPS55P47111 GLO3YER122C 1482 nt2.36□□□□□ -2.03
VPS55P47111 MDL1YLR188W 2088 nt2.36□□□□□ -2.03
VPS55P47111 SIR1YKR101W 1965 nt2.36□□□□□ -2.03
VPS55P47111 MAK21YDR060W 3078 nt2.36□□□□□ -2.03
VPS55P47111 PRR2YDL214C 2100 nt2.35□□□□□ -2.03
VPS55P47111 YKL222CYKL222C 2118 nt2.35□□□□□ -2.03
VPS55P47111 BMH2YDR099W 822 nt2.35□□□□□ -2.03
VPS55P47111 RPS18AYDR450W 441 nt2.35□□□□□ -2.03
VPS55P47111 FMP48YGR052W 1110 nt2.35□□□□□ -2.03
VPS55P47111 COS6YGR295C 1146 nt2.35□□□□□ -2.03
VPS55P47111 IRC18YJL037W 675 nt2.35□□□□□ -2.03
VPS55P47111 SDO1YLR022C 753 nt2.35□□□□□ -2.03
VPS55P47111 SEC14YMR079W 915 nt2.35□□□□□ -2.03
VPS55P47111 IST1YNL265C 897 nt2.35□□□□□ -2.03
VPS55P47111 VID27YNL212W 2349 nt2.35□□□□□ -2.03
VPS55P47111 SEC7YDR170C 6030 nt2.35□□□□□ -2.03
VPS55P47111 YOR296WYOR296W 3870 nt2.35□□□□□ -2.03
VPS55P47111 DBP7YKR024C 2229 nt2.34□□□□□ -2.03
VPS55P47111 YME2YMR302C 2553 nt2.34□□□□□ -2.03
VPS55P47111 ROG1YGL144C 2058 nt2.34□□□□□ -2.03
VPS55P47111 YHL005CYHL005C 393 nt2.34□□□□□ -2.03
VPS55P47111 RPS0BYLR048W 759 nt2.34□□□□□ -2.03
VPS55P47111 TEM1YML064C 738 nt2.34□□□□□ -2.03
VPS55P47111 RPL6AYML073C 531 nt2.34□□□□□ -2.03
VPS55P47111 RUF5-1RUF5-1 710 nt2.34□□□□□ -2.03
VPS55P47111 RUF5-2RUF5-2 710 nt2.34□□□□□ -2.03
VPS55P47111 VAM10YOR068C 345 nt2.34□□□□□ -2.03
VPS55P47111 MRPL37YBR268W 318 nt2.34□□□□□ -2.03
VPS55P47111 KAP104YBR017C 2757 nt2.34□□□□□ -2.04
VPS55P47111 PRP8YHR165C 7242 nt2.34□□□□□ -2.04
VPS55P47111 UBP14YBR058C 2346 nt2.34□□□□□ -2.04
VPS55P47111 DBP10YDL031W 2988 nt2.34□□□□□ -2.04
VPS55P47111 MDM1YML104C 3384 nt2.33□□□□□ -2.04
VPS55P47111 NAM9YNL137C 1461 nt2.33□□□□□ -2.04
VPS55P47111 BPT1YLL015W 4680 nt2.33□□□□□ -2.04
VPS55P47111 YDR089WYDR089W 2610 nt2.33□□□□□ -2.04
VPS55P47111 WHI4YDL224C 1950 nt2.33□□□□□ -2.04
VPS55P47111 YDL032WYDL032W 312 nt2.33□□□□□ -2.04
VPS55P47111 PPX1YHR201C 1194 nt2.33□□□□□ -2.04
VPS55P47111 YIL175WYIL175W 318 nt2.33□□□□□ -2.04
VPS55P47111 YJL222W-BYJL222W-B 138 nt2.33□□□□□ -2.04
VPS55P47111 MTD1YKR080W 963 nt2.33□□□□□ -2.04
VPS55P47111 CDC73YLR418C 1182 nt2.33□□□□□ -2.04
VPS55P47111 POC4YPL144W 447 nt2.33□□□□□ -2.04
VPS55P47111 YBR134WYBR134W 402 nt2.33□□□□□ -2.04
VPS55P47111 TLC1TLC1 1301 nt2.33□□□□□ -2.04
VPS55P47111 NPL6YMR091C 1308 nt2.33□□□□□ -2.04
VPS55P47111 YBL005W-BYBL005W-B 5268 nt2.33□□□□□ -2.04
VPS55P47111 ACK1YDL203C 1872 nt2.33□□□□□ -2.04
VPS55P47111 SOF1YLL011W 1470 nt2.33□□□□□ -2.04
VPS55P47111 MMR1YLR190W 1476 nt2.33□□□□□ -2.04
VPS55P47111 FUN30YAL019W 3396 nt2.32□□□□□ -2.04
VPS55P47111 YDR098C-BYDR098C-B 5268 nt2.32□□□□□ -2.04
VPS55P47111 YDR210C-DYDR210C-D 5268 nt2.32□□□□□ -2.04
VPS55P47111 YDR316W-BYDR316W-B 5268 nt2.32□□□□□ -2.04
VPS55P47111 YDR365W-BYDR365W-B 5268 nt2.32□□□□□ -2.04
VPS55P47111 YER138CYER138C 5268 nt2.32□□□□□ -2.04
VPS55P47111 YER160CYER160C 5268 nt2.32□□□□□ -2.04
VPS55P47111 YGR038C-BYGR038C-B 5268 nt2.32□□□□□ -2.04
VPS55P47111 YGR161C-DYGR161C-D 5268 nt2.32□□□□□ -2.04
VPS55P47111 YJR027WYJR027W 5268 nt2.32□□□□□ -2.04
VPS55P47111 YLR157C-BYLR157C-B 5268 nt2.32□□□□□ -2.04
VPS55P47111 YML039WYML039W 5268 nt2.32□□□□□ -2.04
VPS55P47111 YML045WYML045W 5268 nt2.32□□□□□ -2.04
VPS55P47111 YMR050CYMR050C 5268 nt2.32□□□□□ -2.04
VPS55P47111 YOL103W-BYOL103W-B 5268 nt2.32□□□□□ -2.04
VPS55P47111 YBR012W-BYBR012W-B 5271 nt2.32□□□□□ -2.04
VPS55P47111 YOR142W-BYOR142W-B 5268 nt2.32□□□□□ -2.04
VPS55P47111 YPL257W-BYPL257W-B 5268 nt2.32□□□□□ -2.04
VPS55P47111 YPR158W-BYPR158W-B 5271 nt2.32□□□□□ -2.04
VPS55P47111 JJJ1YNL227C 1773 nt2.32□□□□□ -2.04
VPS55P47111 MRH1YDR033W 963 nt2.32□□□□□ -2.04
VPS55P47111 YHP1YDR451C 1062 nt2.32□□□□□ -2.04
VPS55P47111 RPL23BYER117W 414 nt2.32□□□□□ -2.04
VPS55P47111 ERG26YGL001C 1050 nt2.32□□□□□ -2.04
VPS55P47111 VMA22YHR060W 546 nt2.32□□□□□ -2.04
VPS55P47111 MBB1YJL199C 327 nt2.32□□□□□ -2.04
VPS55P47111 YJR128WYJR128W 360 nt2.32□□□□□ -2.04
VPS55P47111 RPL8BYLL045C 771 nt2.32□□□□□ -2.04
VPS55P47111 COA4YLR218C 453 nt2.32□□□□□ -2.04
VPS55P47111 NIT3YLR351C 876 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms