Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFC3P40938 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFC3P40938 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
RFC3P40938 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFC3P40938 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.76■□□□□ 0.75
RFC3P40938 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC3P40938 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC3P40938 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC3P40938 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC3P40938 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.76■□□□□ 0.75
RFC3P40938 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RFC3P40938 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFC3P40938 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.76■□□□□ 0.75
RFC3P40938 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.76■□□□□ 0.75
RFC3P40938 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC3P40938 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.76■□□□□ 0.75
RFC3P40938 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.76■□□□□ 0.75
RFC3P40938 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC3P40938 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFC3P40938 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.76■□□□□ 0.75
RFC3P40938 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RFC3P40938 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.76■□□□□ 0.75
RFC3P40938 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFC3P40938 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC3P40938 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC3P40938 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC3P40938 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.75■□□□□ 0.75
RFC3P40938 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC3P40938 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.75■□□□□ 0.75
RFC3P40938 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFC3P40938 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC3P40938 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.75■□□□□ 0.75
RFC3P40938 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.75■□□□□ 0.75
RFC3P40938 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.75■□□□□ 0.75
RFC3P40938 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.75■□□□□ 0.75
RFC3P40938 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RFC3P40938 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFC3P40938 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
RFC3P40938 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.75■□□□□ 0.75
RFC3P40938 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFC3P40938 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RFC3P40938 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFC3P40938 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RFC3P40938 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RFC3P40938 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFC3P40938 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RFC3P40938 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.74■□□□□ 0.75
RFC3P40938 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFC3P40938 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.74■□□□□ 0.75
RFC3P40938 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.74■□□□□ 0.75
RFC3P40938 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
RFC3P40938 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.74■□□□□ 0.75
RFC3P40938 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFC3P40938 AC004854.2-201ENST00000608450 1441 ntBASIC19.74■□□□□ 0.75
RFC3P40938 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.74■□□□□ 0.75
RFC3P40938 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFC3P40938 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC3P40938 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RFC3P40938 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
RFC3P40938 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC3P40938 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC3P40938 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC3P40938 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC3P40938 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RFC3P40938 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC3P40938 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC3P40938 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.73■□□□□ 0.75
RFC3P40938 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.73■□□□□ 0.75
RFC3P40938 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
RFC3P40938 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.73■□□□□ 0.75
RFC3P40938 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.73■□□□□ 0.75
RFC3P40938 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.73■□□□□ 0.75
RFC3P40938 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.73■□□□□ 0.75
RFC3P40938 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC3P40938 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC3P40938 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC3P40938 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC3P40938 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC3P40938 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC3P40938 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RFC3P40938 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.72■□□□□ 0.75
RFC3P40938 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
RFC3P40938 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC3P40938 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC3P40938 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC3P40938 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFC3P40938 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.72■□□□□ 0.75
RFC3P40938 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC3P40938 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.71■□□□□ 0.75
RFC3P40938 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC3P40938 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC3P40938 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RFC3P40938 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFC3P40938 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFC3P40938 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFC3P40938 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC3P40938 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RFC3P40938 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RFC3P40938 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC3P40938 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms