Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CEACAM3P40198 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CEACAM3P40198 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CEACAM3P40198 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CEACAM3P40198 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CEACAM3P40198 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
CEACAM3P40198 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.57■□□□□ 0.4
CEACAM3P40198 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 MIR572-201ENST00000384983 95 ntBASIC17.57■□□□□ 0.4
CEACAM3P40198 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.57■□□□□ 0.4
CEACAM3P40198 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.57■□□□□ 0.4
CEACAM3P40198 AL034346.1-201ENST00000568244 1277 ntBASIC17.57■□□□□ 0.4
CEACAM3P40198 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CEACAM3P40198 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CEACAM3P40198 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CEACAM3P40198 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CEACAM3P40198 AC137767.1-201ENST00000602918 1920 ntBASIC17.57■□□□□ 0.4
CEACAM3P40198 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CEACAM3P40198 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CEACAM3P40198 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.56■□□□□ 0.4
CEACAM3P40198 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CEACAM3P40198 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.56■□□□□ 0.4
CEACAM3P40198 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.56■□□□□ 0.4
CEACAM3P40198 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.56■□□□□ 0.4
CEACAM3P40198 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CEACAM3P40198 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.56■□□□□ 0.4
CEACAM3P40198 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CEACAM3P40198 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CEACAM3P40198 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CEACAM3P40198 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 IRS3P-201ENST00000223076 1006 ntBASIC17.55■□□□□ 0.4
CEACAM3P40198 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.55■□□□□ 0.4
CEACAM3P40198 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.55■□□□□ 0.4
CEACAM3P40198 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.55■□□□□ 0.4
CEACAM3P40198 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.55■□□□□ 0.4
CEACAM3P40198 AC105233.4-201ENST00000642045 216 ntBASIC17.55■□□□□ 0.4
CEACAM3P40198 AC242852.2-201ENST00000615738 1807 ntBASIC17.55■□□□□ 0.4
CEACAM3P40198 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.55■□□□□ 0.4
CEACAM3P40198 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.55■□□□□ 0.4
CEACAM3P40198 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CEACAM3P40198 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.55■□□□□ 0.4
CEACAM3P40198 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEACAM3P40198 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEACAM3P40198 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CEACAM3P40198 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEACAM3P40198 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.54■□□□□ 0.4
CEACAM3P40198 AC139530.1-201ENST00000575312 1977 ntBASIC17.54■□□□□ 0.4
CEACAM3P40198 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEACAM3P40198 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CEACAM3P40198 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.54■□□□□ 0.4
CEACAM3P40198 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEACAM3P40198 AL354811.1-201ENST00000610286 706 ntBASIC17.54■□□□□ 0.4
CEACAM3P40198 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.54■□□□□ 0.4
CEACAM3P40198 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.54■□□□□ 0.4
CEACAM3P40198 AL358852.1-201ENST00000623174 1268 ntBASIC17.54■□□□□ 0.4
CEACAM3P40198 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CEACAM3P40198 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CEACAM3P40198 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.54■□□□□ 0.4
CEACAM3P40198 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEACAM3P40198 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEACAM3P40198 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.53■□□□□ 0.4
CEACAM3P40198 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CEACAM3P40198 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEACAM3P40198 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CEACAM3P40198 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms