Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 ENA1YDR040C 3276 nt3.8□□□□□ -1.8
RTR1P40084 SPO1YNL012W 1896 nt3.79□□□□□ -1.8
RTR1P40084 YME2YMR302C 2553 nt3.79□□□□□ -1.8
RTR1P40084 APP1YNL094W 1764 nt3.79□□□□□ -1.8
RTR1P40084 CSM3YMR048W 954 nt3.79□□□□□ -1.8
RTR1P40084 TPK2YPL203W 1143 nt3.79□□□□□ -1.8
RTR1P40084 SPS2YDR522C 1509 nt3.79□□□□□ -1.8
RTR1P40084 TRM13YOL125W 1431 nt3.78□□□□□ -1.8
RTR1P40084 URC2YDR520C 2319 nt3.78□□□□□ -1.8
RTR1P40084 CNA1YLR433C 1662 nt3.78□□□□□ -1.8
RTR1P40084 TLC1TLC1 1301 nt3.78□□□□□ -1.8
RTR1P40084 ACK1YDL203C 1872 nt3.78□□□□□ -1.8
RTR1P40084 SMP3YOR149C 1551 nt3.78□□□□□ -1.8
RTR1P40084 ERG26YGL001C 1050 nt3.78□□□□□ -1.8
RTR1P40084 COS12YGL263W 1143 nt3.78□□□□□ -1.8
RTR1P40084 YGR015CYGR015C 987 nt3.78□□□□□ -1.8
RTR1P40084 YHB1YGR234W 1200 nt3.78□□□□□ -1.8
RTR1P40084 YHI9YHR029C 885 nt3.78□□□□□ -1.8
RTR1P40084 YKR047WYKR047W 306 nt3.78□□□□□ -1.8
RTR1P40084 NUS1YDL193W 1128 nt3.77□□□□□ -1.81
RTR1P40084 MRH1YDR033W 963 nt3.77□□□□□ -1.81
RTR1P40084 PPX1YHR201C 1194 nt3.77□□□□□ -1.81
RTR1P40084 RHO5YNL180C 996 nt3.77□□□□□ -1.81
RTR1P40084 NPL4YBR170C 1743 nt3.77□□□□□ -1.81
RTR1P40084 MNR2YKL064W 2910 nt3.77□□□□□ -1.81
RTR1P40084 SEC27YGL137W 2670 nt3.76□□□□□ -1.81
RTR1P40084 ROG1YGL144C 2058 nt3.76□□□□□ -1.81
RTR1P40084 HMF1YER057C 390 nt3.76□□□□□ -1.81
RTR1P40084 YBR255C-AYBR255C-A 363 nt3.76□□□□□ -1.81
RTR1P40084 RPN2YIL075C 2838 nt3.76□□□□□ -1.81
RTR1P40084 ERB1YMR049C 2424 nt3.75□□□□□ -1.81
RTR1P40084 DBP10YDL031W 2988 nt3.75□□□□□ -1.81
RTR1P40084 NSA2YER126C 786 nt3.75□□□□□ -1.81
RTR1P40084 DAL2YIR029W 1032 nt3.75□□□□□ -1.81
RTR1P40084 YKL033W-AYKL033W-A 711 nt3.75□□□□□ -1.81
RTR1P40084 RPL8BYLL045C 771 nt3.75□□□□□ -1.81
RTR1P40084 YMR087WYMR087W 855 nt3.75□□□□□ -1.81
RTR1P40084 OCA2YNL056W 594 nt3.75□□□□□ -1.81
RTR1P40084 CTR86YCR054C 1692 nt3.75□□□□□ -1.81
RTR1P40084 SLM5YCR024C 1479 nt3.74□□□□□ -1.81
RTR1P40084 YSP2YDR326C 4317 nt3.74□□□□□ -1.81
RTR1P40084 DET1YDR051C 1005 nt3.74□□□□□ -1.81
RTR1P40084 YDR464C-AYDR464C-A 189 nt3.74□□□□□ -1.81
RTR1P40084 PEX12YMR026C 1200 nt3.74□□□□□ -1.81
RTR1P40084 YBR138CYBR138C 1575 nt3.74□□□□□ -1.81
RTR1P40084 MRPS9YBR146W 837 nt3.74□□□□□ -1.81
RTR1P40084 SPO14YKR031C 5052 nt3.74□□□□□ -1.81
RTR1P40084 SPT16YGL207W 3108 nt3.73□□□□□ -1.81
RTR1P40084 HPR1YDR138W 2259 nt3.73□□□□□ -1.81
RTR1P40084 PRR2YDL214C 2100 nt3.73□□□□□ -1.81
RTR1P40084 RPL23BYER117W 414 nt3.73□□□□□ -1.81
RTR1P40084 YHL005CYHL005C 393 nt3.73□□□□□ -1.81
RTR1P40084 SDH3YKL141W 597 nt3.73□□□□□ -1.81
RTR1P40084 COA4YLR218C 453 nt3.73□□□□□ -1.81
RTR1P40084 NIT3YLR351C 876 nt3.73□□□□□ -1.81
RTR1P40084 RRG9YNL213C 645 nt3.73□□□□□ -1.81
RTR1P40084 RUF5-1RUF5-1 710 nt3.73□□□□□ -1.81
RTR1P40084 RUF5-2RUF5-2 710 nt3.73□□□□□ -1.81
RTR1P40084 FLO10YKR102W 3510 nt3.73□□□□□ -1.81
RTR1P40084 NAT1YDL040C 2565 nt3.73□□□□□ -1.81
RTR1P40084 TYR1YBR166C 1359 nt3.73□□□□□ -1.81
RTR1P40084 ECM21YBL101C 3354 nt3.72□□□□□ -1.81
RTR1P40084 BUD6YLR319C 2367 nt3.72□□□□□ -1.81
RTR1P40084 TOS8YGL096W 831 nt3.72□□□□□ -1.81
RTR1P40084 SPO12YHR152W 522 nt3.72□□□□□ -1.81
RTR1P40084 YAL064W-BYAL064W-B 381 nt3.72□□□□□ -1.81
RTR1P40084 IST1YNL265C 897 nt3.72□□□□□ -1.81
RTR1P40084 DIM1YPL266W 957 nt3.72□□□□□ -1.81
RTR1P40084 YPR015CYPR015C 744 nt3.72□□□□□ -1.81
RTR1P40084 MRPL37YBR268W 318 nt3.72□□□□□ -1.81
RTR1P40084 DHR2YKL078W 2208 nt3.72□□□□□ -1.81
RTR1P40084 VAC8YEL013W 1737 nt3.72□□□□□ -1.81
RTR1P40084 YKL050CYKL050C 2769 nt3.72□□□□□ -1.81
RTR1P40084 YIL092WYIL092W 1902 nt3.72□□□□□ -1.81
RTR1P40084 CSR2YPR030W 3366 nt3.71□□□□□ -1.81
RTR1P40084 PRP22YER013W 3438 nt3.71□□□□□ -1.82
RTR1P40084 IMG2YCR071C 441 nt3.71□□□□□ -1.82
RTR1P40084 PRP11YDL043C 801 nt3.71□□□□□ -1.82
RTR1P40084 BMH2YDR099W 822 nt3.71□□□□□ -1.82
RTR1P40084 PHM6YDR281C 315 nt3.71□□□□□ -1.82
RTR1P40084 YJR128WYJR128W 360 nt3.71□□□□□ -1.82
RTR1P40084 YLR297WYLR297W 390 nt3.71□□□□□ -1.82
RTR1P40084 REX4YOL080C 870 nt3.71□□□□□ -1.82
RTR1P40084 RRP36YOR287C 903 nt3.71□□□□□ -1.82
RTR1P40084 RPA190YOR341W 4995 nt3.71□□□□□ -1.82
RTR1P40084 FUN30YAL019W 3396 nt3.71□□□□□ -1.82
RTR1P40084 GCD6YDR211W 2139 nt3.7□□□□□ -1.82
RTR1P40084 COS7YDL248W 1152 nt3.7□□□□□ -1.82
RTR1P40084 COS5YJR161C 1152 nt3.7□□□□□ -1.82
RTR1P40084 SFH1YLR321C 1281 nt3.7□□□□□ -1.82
RTR1P40084 HTA2YBL003C 399 nt3.7□□□□□ -1.82
RTR1P40084 SMA2YML066C 1110 nt3.7□□□□□ -1.82
RTR1P40084 MSB2YGR014W 3921 nt3.69□□□□□ -1.82
RTR1P40084 POL2YNL262W 6669 nt3.69□□□□□ -1.82
RTR1P40084 GEP4YHR100C 558 nt3.69□□□□□ -1.82
RTR1P40084 YIL169CYIL169C 2988 nt3.69□□□□□ -1.82
RTR1P40084 CDC73YLR418C 1182 nt3.69□□□□□ -1.82
RTR1P40084 snR17asnR17a 333 nt3.69□□□□□ -1.82
RTR1P40084 ILS1YBL076C 3219 nt3.69□□□□□ -1.82
RTR1P40084 RNT1YMR239C 1416 nt3.69□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms