Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCNN1AP37088 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
SCNN1AP37088 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCNN1AP37088 AC105265.2-201ENST00000467189 838 ntBASIC22.58■■□□□ 1.21
SCNN1AP37088 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.58■■□□□ 1.21
SCNN1AP37088 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
SCNN1AP37088 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.58■■□□□ 1.21
SCNN1AP37088 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCNN1AP37088 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.58■■□□□ 1.21
SCNN1AP37088 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SCNN1AP37088 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SCNN1AP37088 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.58■■□□□ 1.2
SCNN1AP37088 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCNN1AP37088 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCNN1AP37088 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SCNN1AP37088 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.57■■□□□ 1.2
SCNN1AP37088 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.57■■□□□ 1.2
SCNN1AP37088 AC012414.1-201ENST00000556676 535 ntBASIC22.57■■□□□ 1.2
SCNN1AP37088 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.57■■□□□ 1.2
SCNN1AP37088 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SCNN1AP37088 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.57■■□□□ 1.2
SCNN1AP37088 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCNN1AP37088 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCNN1AP37088 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SCNN1AP37088 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCNN1AP37088 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SCNN1AP37088 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.57■■□□□ 1.2
SCNN1AP37088 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.56■■□□□ 1.2
SCNN1AP37088 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.56■■□□□ 1.2
SCNN1AP37088 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.56■■□□□ 1.2
SCNN1AP37088 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.56■■□□□ 1.2
SCNN1AP37088 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.56■■□□□ 1.2
SCNN1AP37088 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.56■■□□□ 1.2
SCNN1AP37088 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.56■■□□□ 1.2
SCNN1AP37088 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.56■■□□□ 1.2
SCNN1AP37088 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SCNN1AP37088 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SCNN1AP37088 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SCNN1AP37088 AP004607.7-201ENST00000527152 1677 ntBASIC22.55■■□□□ 1.2
SCNN1AP37088 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SCNN1AP37088 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.55■■□□□ 1.2
SCNN1AP37088 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCNN1AP37088 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCNN1AP37088 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SCNN1AP37088 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SCNN1AP37088 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SCNN1AP37088 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.55■■□□□ 1.2
SCNN1AP37088 AL354811.1-201ENST00000610286 706 ntBASIC22.55■■□□□ 1.2
SCNN1AP37088 AL358852.1-201ENST00000623174 1268 ntBASIC22.55■■□□□ 1.2
SCNN1AP37088 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.55■■□□□ 1.2
SCNN1AP37088 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SCNN1AP37088 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCNN1AP37088 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.55■■□□□ 1.2
SCNN1AP37088 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SCNN1AP37088 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.54■■□□□ 1.2
SCNN1AP37088 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.54■■□□□ 1.2
SCNN1AP37088 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SCNN1AP37088 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.54■■□□□ 1.2
SCNN1AP37088 IRS3P-201ENST00000223076 1006 ntBASIC22.54■■□□□ 1.2
SCNN1AP37088 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SCNN1AP37088 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
SCNN1AP37088 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.54■■□□□ 1.2
SCNN1AP37088 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.54■■□□□ 1.2
SCNN1AP37088 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SCNN1AP37088 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SCNN1AP37088 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SCNN1AP37088 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.53■■□□□ 1.2
SCNN1AP37088 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCNN1AP37088 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCNN1AP37088 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCNN1AP37088 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SCNN1AP37088 FAM99A-202ENST00000538190 1989 ntBASIC22.52■■□□□ 1.2
SCNN1AP37088 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.52■■□□□ 1.2
SCNN1AP37088 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCNN1AP37088 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.52■■□□□ 1.2
SCNN1AP37088 AC009237.3-201ENST00000393279 1427 ntBASIC22.52■■□□□ 1.2
SCNN1AP37088 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCNN1AP37088 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCNN1AP37088 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCNN1AP37088 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SCNN1AP37088 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms