Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TBC1D4O60343 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.94■■□□□ 1.26
TBC1D4O60343 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TBC1D4O60343 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
TBC1D4O60343 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
TBC1D4O60343 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.94■■□□□ 1.26
TBC1D4O60343 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TBC1D4O60343 AC055733.4-201ENST00000638462 1354 ntBASIC22.94■■□□□ 1.26
TBC1D4O60343 AC016769.1-201ENST00000409132 1010 ntBASIC22.94■■□□□ 1.26
TBC1D4O60343 CDCA4P2-201ENST00000441182 718 ntBASIC22.94■■□□□ 1.26
TBC1D4O60343 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.94■■□□□ 1.26
TBC1D4O60343 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.94■■□□□ 1.26
TBC1D4O60343 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
TBC1D4O60343 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
TBC1D4O60343 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.94■■□□□ 1.26
TBC1D4O60343 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
TBC1D4O60343 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
TBC1D4O60343 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.93■■□□□ 1.26
TBC1D4O60343 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.93■■□□□ 1.26
TBC1D4O60343 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TBC1D4O60343 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.93■■□□□ 1.26
TBC1D4O60343 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
TBC1D4O60343 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TBC1D4O60343 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.93■■□□□ 1.26
TBC1D4O60343 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TBC1D4O60343 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.93■■□□□ 1.26
TBC1D4O60343 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TBC1D4O60343 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TBC1D4O60343 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TBC1D4O60343 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.92■■□□□ 1.26
TBC1D4O60343 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TBC1D4O60343 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
TBC1D4O60343 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TBC1D4O60343 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.92■■□□□ 1.26
TBC1D4O60343 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TBC1D4O60343 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TBC1D4O60343 ESRRAP2-201ENST00000418437 1549 ntBASIC22.92■■□□□ 1.26
TBC1D4O60343 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TBC1D4O60343 DUSP8P5-201ENST00000422884 1815 ntBASIC22.92■■□□□ 1.26
TBC1D4O60343 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TBC1D4O60343 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TBC1D4O60343 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TBC1D4O60343 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
TBC1D4O60343 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TBC1D4O60343 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.91■■□□□ 1.26
TBC1D4O60343 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TBC1D4O60343 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.91■■□□□ 1.26
TBC1D4O60343 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
TBC1D4O60343 AC073111.5-205ENST00000641717 521 ntBASIC22.91■■□□□ 1.26
TBC1D4O60343 LINC00526-201ENST00000581067 1875 ntBASIC22.91■■□□□ 1.26
TBC1D4O60343 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TBC1D4O60343 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TBC1D4O60343 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.9■■□□□ 1.26
TBC1D4O60343 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TBC1D4O60343 KRT87P-202ENST00000534226 1464 ntBASIC22.9■■□□□ 1.26
TBC1D4O60343 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TBC1D4O60343 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TBC1D4O60343 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TBC1D4O60343 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
TBC1D4O60343 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TBC1D4O60343 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TBC1D4O60343 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.89■■□□□ 1.25
TBC1D4O60343 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.89■■□□□ 1.25
TBC1D4O60343 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TBC1D4O60343 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TBC1D4O60343 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.89■■□□□ 1.25
TBC1D4O60343 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
TBC1D4O60343 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TBC1D4O60343 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.88■■□□□ 1.25
TBC1D4O60343 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.88■■□□□ 1.25
TBC1D4O60343 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.88■■□□□ 1.25
TBC1D4O60343 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.88■■□□□ 1.25
TBC1D4O60343 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.88■■□□□ 1.25
TBC1D4O60343 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.88■■□□□ 1.25
TBC1D4O60343 BID-214ENST00000617586 542 ntTSL 5 BASIC22.88■■□□□ 1.25
TBC1D4O60343 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TBC1D4O60343 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TBC1D4O60343 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.88■■□□□ 1.25
TBC1D4O60343 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TBC1D4O60343 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
TBC1D4O60343 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D4O60343 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D4O60343 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D4O60343 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D4O60343 AC104187.1-201ENST00000607510 612 ntBASIC22.87■■□□□ 1.25
TBC1D4O60343 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D4O60343 AC087742.1-201ENST00000575880 1738 ntBASIC22.87■■□□□ 1.25
TBC1D4O60343 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D4O60343 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D4O60343 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D4O60343 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TBC1D4O60343 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.87■■□□□ 1.25
TBC1D4O60343 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D4O60343 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D4O60343 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D4O60343 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D4O60343 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.86■■□□□ 1.25
TBC1D4O60343 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D4O60343 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TBC1D4O60343 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms