Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
A0A1W2PRF3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
A0A1W2PRF3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
A0A1W2PRF3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
A0A1W2PRF3 AC097381.1-201ENST00000429019 1296 ntBASIC17.71■□□□□ 0.43
A0A1W2PRF3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.71■□□□□ 0.43
A0A1W2PRF3 MIR6821-201ENST00000617625 74 ntBASIC17.71■□□□□ 0.43
A0A1W2PRF3 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.71■□□□□ 0.43
A0A1W2PRF3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
A0A1W2PRF3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
A0A1W2PRF3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
A0A1W2PRF3 OXCT2P1-201ENST00000447263 1535 ntBASIC17.71■□□□□ 0.43
A0A1W2PRF3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.71■□□□□ 0.43
A0A1W2PRF3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.71■□□□□ 0.42
A0A1W2PRF3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
A0A1W2PRF3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.7■□□□□ 0.42
A0A1W2PRF3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
A0A1W2PRF3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
A0A1W2PRF3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.7■□□□□ 0.42
A0A1W2PRF3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.7■□□□□ 0.42
A0A1W2PRF3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
A0A1W2PRF3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.7■□□□□ 0.42
A0A1W2PRF3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
A0A1W2PRF3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.7■□□□□ 0.42
A0A1W2PRF3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 YBX1P1-201ENST00000445822 960 ntBASIC17.69■□□□□ 0.42
A0A1W2PRF3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.69■□□□□ 0.42
A0A1W2PRF3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.69■□□□□ 0.42
A0A1W2PRF3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.69■□□□□ 0.42
A0A1W2PRF3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.69■□□□□ 0.42
A0A1W2PRF3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
A0A1W2PRF3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
A0A1W2PRF3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
A0A1W2PRF3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.68■□□□□ 0.42
A0A1W2PRF3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
A0A1W2PRF3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
A0A1W2PRF3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.68■□□□□ 0.42
A0A1W2PRF3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
A0A1W2PRF3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
A0A1W2PRF3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.68■□□□□ 0.42
A0A1W2PRF3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.68■□□□□ 0.42
A0A1W2PRF3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
A0A1W2PRF3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
A0A1W2PRF3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
A0A1W2PRF3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
A0A1W2PRF3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
A0A1W2PRF3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
A0A1W2PRF3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
A0A1W2PRF3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 SMUG1P1-201ENST00000590640 811 ntBASIC17.67■□□□□ 0.42
A0A1W2PRF3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
A0A1W2PRF3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
A0A1W2PRF3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
A0A1W2PRF3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.66■□□□□ 0.42
A0A1W2PRF3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
A0A1W2PRF3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
A0A1W2PRF3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.66■□□□□ 0.42
A0A1W2PRF3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
A0A1W2PRF3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
A0A1W2PRF3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
A0A1W2PRF3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.66■□□□□ 0.42
A0A1W2PRF3 AC027612.3-201ENST00000413684 1047 ntBASIC17.66■□□□□ 0.42
A0A1W2PRF3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.66■□□□□ 0.42
A0A1W2PRF3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.66■□□□□ 0.42
A0A1W2PRF3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.66■□□□□ 0.42
A0A1W2PRF3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
A0A1W2PRF3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
A0A1W2PRF3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
A0A1W2PRF3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
A0A1W2PRF3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
A0A1W2PRF3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.65■□□□□ 0.42
A0A1W2PRF3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms