Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.44□□□□□ -0.1
Trav3n-3A0A0G2JEM0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Gm43566-201ENSMUST00000196851 808 ntBASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3n-3A0A0G2JEM0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms