Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRBV5-4A0A0C4DH59 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRBV5-4A0A0C4DH59 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRBV5-4A0A0C4DH59 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRBV5-4A0A0C4DH59 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRBV5-4A0A0C4DH59 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRBV5-4A0A0C4DH59 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRBV5-4A0A0C4DH59 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.39■■□□□ 1.01
TRBV5-4A0A0C4DH59 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRBV5-4A0A0C4DH59 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.39■■□□□ 1.01
TRBV5-4A0A0C4DH59 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRBV5-4A0A0C4DH59 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.39■■□□□ 1.01
TRBV5-4A0A0C4DH59 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.39■■□□□ 1.01
TRBV5-4A0A0C4DH59 C11orf96-202ENST00000528572 1834 ntBASIC21.39■■□□□ 1.01
TRBV5-4A0A0C4DH59 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 AC105233.4-201ENST00000642045 216 ntBASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRBV5-4A0A0C4DH59 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRBV5-4A0A0C4DH59 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRBV5-4A0A0C4DH59 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV5-4A0A0C4DH59 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV5-4A0A0C4DH59 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRBV5-4A0A0C4DH59 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV5-4A0A0C4DH59 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV5-4A0A0C4DH59 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV5-4A0A0C4DH59 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV5-4A0A0C4DH59 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV5-4A0A0C4DH59 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 AC012414.1-201ENST00000556676 535 ntBASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 AL034346.1-201ENST00000568244 1277 ntBASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV5-4A0A0C4DH59 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 AP004607.7-201ENST00000527152 1677 ntBASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 FAM99A-202ENST00000538190 1989 ntBASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TRBV5-4A0A0C4DH59 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 IRS3P-201ENST00000223076 1006 ntBASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.33■■□□□ 1.01
TRBV5-4A0A0C4DH59 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms