Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV5A0A0B4J249 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV5A0A0B4J249 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV5A0A0B4J249 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
TRAV5A0A0B4J249 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV5A0A0B4J249 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV5A0A0B4J249 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
TRAV5A0A0B4J249 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV5A0A0B4J249 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 Z98882.1-201ENST00000622160 2253 ntBASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 AC073130.3-201ENST00000624389 2278 ntBASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 AL031848.2-201ENST00000607670 837 ntBASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 AC009102.2-201ENST00000606772 1639 ntBASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 AC021242.3-201ENST00000607598 1377 ntBASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV5A0A0B4J249 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 AC012354.3-201ENST00000623734 483 ntBASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV5A0A0B4J249 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRAV5A0A0B4J249 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAV5A0A0B4J249 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV5A0A0B4J249 FEM1AP4-201ENST00000443167 1987 ntBASIC16.71■□□□□ 0.27
TRAV5A0A0B4J249 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV5A0A0B4J249 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV5A0A0B4J249 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV5A0A0B4J249 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV5A0A0B4J249 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms