Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Clcn2Q9R0A1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Clcn2Q9R0A1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Clcn2Q9R0A1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.84■■□□□ 1.73
Clcn2Q9R0A1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Clcn2Q9R0A1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Clcn2Q9R0A1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Clcn2Q9R0A1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Clcn2Q9R0A1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Clcn2Q9R0A1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
Clcn2Q9R0A1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Clcn2Q9R0A1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Clcn2Q9R0A1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Clcn2Q9R0A1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Clcn2Q9R0A1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Clcn2Q9R0A1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.75■■□□□ 1.71
Clcn2Q9R0A1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Clcn2Q9R0A1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Clcn2Q9R0A1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.72■■□□□ 1.71
Clcn2Q9R0A1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Clcn2Q9R0A1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Clcn2Q9R0A1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Clcn2Q9R0A1 Peli2-204ENSMUST00000226513 1320 ntBASIC25.69■■□□□ 1.7
Clcn2Q9R0A1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
Clcn2Q9R0A1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Clcn2Q9R0A1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Clcn2Q9R0A1 Amer2-203ENSMUST00000225247 2662 ntBASIC25.68■■□□□ 1.7
Clcn2Q9R0A1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Clcn2Q9R0A1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Clcn2Q9R0A1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Clcn2Q9R0A1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Clcn2Q9R0A1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Clcn2Q9R0A1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Clcn2Q9R0A1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Clcn2Q9R0A1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
Clcn2Q9R0A1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Clcn2Q9R0A1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Clcn2Q9R0A1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Clcn2Q9R0A1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Clcn2Q9R0A1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Clcn2Q9R0A1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Clcn2Q9R0A1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Clcn2Q9R0A1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Clcn2Q9R0A1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Clcn2Q9R0A1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Clcn2Q9R0A1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Clcn2Q9R0A1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Clcn2Q9R0A1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Clcn2Q9R0A1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Clcn2Q9R0A1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.51■■□□□ 1.67
Clcn2Q9R0A1 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.51■■□□□ 1.67
Clcn2Q9R0A1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Clcn2Q9R0A1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Clcn2Q9R0A1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Clcn2Q9R0A1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Clcn2Q9R0A1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Clcn2Q9R0A1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Clcn2Q9R0A1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Clcn2Q9R0A1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.46■■□□□ 1.67
Clcn2Q9R0A1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Clcn2Q9R0A1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Clcn2Q9R0A1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Clcn2Q9R0A1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Clcn2Q9R0A1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Clcn2Q9R0A1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.4■■□□□ 1.66
Clcn2Q9R0A1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Clcn2Q9R0A1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Clcn2Q9R0A1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Clcn2Q9R0A1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Clcn2Q9R0A1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.39■■□□□ 1.65
Clcn2Q9R0A1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Clcn2Q9R0A1 Gm16148-201ENSMUST00000119653 893 ntBASIC25.38■■□□□ 1.65
Clcn2Q9R0A1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Clcn2Q9R0A1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Clcn2Q9R0A1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Clcn2Q9R0A1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.37■■□□□ 1.65
Clcn2Q9R0A1 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.35■■□□□ 1.65
Clcn2Q9R0A1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Clcn2Q9R0A1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Clcn2Q9R0A1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Clcn2Q9R0A1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Clcn2Q9R0A1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Clcn2Q9R0A1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.32■■□□□ 1.64
Clcn2Q9R0A1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Clcn2Q9R0A1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Clcn2Q9R0A1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Clcn2Q9R0A1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Clcn2Q9R0A1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Clcn2Q9R0A1 Zfp131-205ENSMUST00000223812 663 ntBASIC25.29■■□□□ 1.64
Clcn2Q9R0A1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Clcn2Q9R0A1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.29■■□□□ 1.64
Clcn2Q9R0A1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Clcn2Q9R0A1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Clcn2Q9R0A1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Clcn2Q9R0A1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Clcn2Q9R0A1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Clcn2Q9R0A1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.26■■□□□ 1.63
Clcn2Q9R0A1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Clcn2Q9R0A1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Clcn2Q9R0A1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms