Protein–RNA interactions for Protein: Q9D1Y9

Shisal2b, Protein shisa-like-2B, mousemouse

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisal2bQ9D1Y9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisal2bQ9D1Y9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisal2bQ9D1Y9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.65■□□□□ 0.74
Shisal2bQ9D1Y9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisal2bQ9D1Y9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Shisal2bQ9D1Y9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisal2bQ9D1Y9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisal2bQ9D1Y9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisal2bQ9D1Y9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisal2bQ9D1Y9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisal2bQ9D1Y9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Shisal2bQ9D1Y9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisal2bQ9D1Y9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisal2bQ9D1Y9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisal2bQ9D1Y9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Shisal2bQ9D1Y9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.62■□□□□ 0.73
Shisal2bQ9D1Y9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Shisal2bQ9D1Y9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisal2bQ9D1Y9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisal2bQ9D1Y9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Shisal2bQ9D1Y9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Shisal2bQ9D1Y9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisal2bQ9D1Y9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisal2bQ9D1Y9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.56■□□□□ 0.72
Shisal2bQ9D1Y9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisal2bQ9D1Y9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisal2bQ9D1Y9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shisal2bQ9D1Y9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shisal2bQ9D1Y9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.52■□□□□ 0.71
Shisal2bQ9D1Y9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shisal2bQ9D1Y9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Shisal2bQ9D1Y9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Shisal2bQ9D1Y9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shisal2bQ9D1Y9 Rab21-202ENSMUST00000218831 843 ntBASIC19.51■□□□□ 0.71
Shisal2bQ9D1Y9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisal2bQ9D1Y9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shisal2bQ9D1Y9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.49■□□□□ 0.71
Shisal2bQ9D1Y9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisal2bQ9D1Y9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Shisal2bQ9D1Y9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shisal2bQ9D1Y9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.48■□□□□ 0.71
Shisal2bQ9D1Y9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shisal2bQ9D1Y9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shisal2bQ9D1Y9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shisal2bQ9D1Y9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Shisal2bQ9D1Y9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shisal2bQ9D1Y9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Shisal2bQ9D1Y9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisal2bQ9D1Y9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisal2bQ9D1Y9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisal2bQ9D1Y9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisal2bQ9D1Y9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisal2bQ9D1Y9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisal2bQ9D1Y9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Shisal2bQ9D1Y9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisal2bQ9D1Y9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Shisal2bQ9D1Y9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisal2bQ9D1Y9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Shisal2bQ9D1Y9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shisal2bQ9D1Y9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Shisal2bQ9D1Y9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisal2bQ9D1Y9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shisal2bQ9D1Y9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shisal2bQ9D1Y9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shisal2bQ9D1Y9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shisal2bQ9D1Y9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Shisal2bQ9D1Y9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisal2bQ9D1Y9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.35■□□□□ 0.69
Shisal2bQ9D1Y9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisal2bQ9D1Y9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shisal2bQ9D1Y9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shisal2bQ9D1Y9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.33■□□□□ 0.68
Shisal2bQ9D1Y9 Mipep-204ENSMUST00000225043 1548 ntBASIC19.32■□□□□ 0.68
Shisal2bQ9D1Y9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shisal2bQ9D1Y9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shisal2bQ9D1Y9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.3■□□□□ 0.68
Shisal2bQ9D1Y9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisal2bQ9D1Y9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Shisal2bQ9D1Y9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisal2bQ9D1Y9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisal2bQ9D1Y9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisal2bQ9D1Y9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisal2bQ9D1Y9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.28■□□□□ 0.68
Shisal2bQ9D1Y9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisal2bQ9D1Y9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Shisal2bQ9D1Y9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisal2bQ9D1Y9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shisal2bQ9D1Y9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisal2bQ9D1Y9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisal2bQ9D1Y9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Shisal2bQ9D1Y9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisal2bQ9D1Y9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisal2bQ9D1Y9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Shisal2bQ9D1Y9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisal2bQ9D1Y9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shisal2bQ9D1Y9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Shisal2bQ9D1Y9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisal2bQ9D1Y9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisal2bQ9D1Y9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisal2bQ9D1Y9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms