Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ssr1Q9CY50 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ssr1Q9CY50 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ssr1Q9CY50 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ssr1Q9CY50 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ssr1Q9CY50 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ssr1Q9CY50 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.96■■□□□ 1.91
Ssr1Q9CY50 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ssr1Q9CY50 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ssr1Q9CY50 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ssr1Q9CY50 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ssr1Q9CY50 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Ssr1Q9CY50 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ssr1Q9CY50 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Ssr1Q9CY50 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.91■■□□□ 1.9
Ssr1Q9CY50 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ssr1Q9CY50 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ssr1Q9CY50 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ssr1Q9CY50 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.89
Ssr1Q9CY50 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ssr1Q9CY50 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.88■■□□□ 1.89
Ssr1Q9CY50 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Ssr1Q9CY50 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.87■■□□□ 1.89
Ssr1Q9CY50 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ssr1Q9CY50 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.85■■□□□ 1.89
Ssr1Q9CY50 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ssr1Q9CY50 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ssr1Q9CY50 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.84■■□□□ 1.89
Ssr1Q9CY50 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Ssr1Q9CY50 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.83■■□□□ 1.89
Ssr1Q9CY50 Peli2-204ENSMUST00000226513 1320 ntBASIC26.83■■□□□ 1.89
Ssr1Q9CY50 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ssr1Q9CY50 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ssr1Q9CY50 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
Ssr1Q9CY50 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ssr1Q9CY50 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ssr1Q9CY50 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ssr1Q9CY50 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.88
Ssr1Q9CY50 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ssr1Q9CY50 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Ssr1Q9CY50 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.75■■□□□ 1.87
Ssr1Q9CY50 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ssr1Q9CY50 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ssr1Q9CY50 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.73■■□□□ 1.87
Ssr1Q9CY50 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Ssr1Q9CY50 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ssr1Q9CY50 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ssr1Q9CY50 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ssr1Q9CY50 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ssr1Q9CY50 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Ssr1Q9CY50 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ssr1Q9CY50 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ssr1Q9CY50 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.66■■□□□ 1.86
Ssr1Q9CY50 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ssr1Q9CY50 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ssr1Q9CY50 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ssr1Q9CY50 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ssr1Q9CY50 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ssr1Q9CY50 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Ssr1Q9CY50 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ssr1Q9CY50 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
Ssr1Q9CY50 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ssr1Q9CY50 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Ssr1Q9CY50 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ssr1Q9CY50 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.6■■□□□ 1.85
Ssr1Q9CY50 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ssr1Q9CY50 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ssr1Q9CY50 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ssr1Q9CY50 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ssr1Q9CY50 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ssr1Q9CY50 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ssr1Q9CY50 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ssr1Q9CY50 Gm24804-201ENSMUST00000174982 85 ntBASIC26.55■■□□□ 1.84
Ssr1Q9CY50 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ssr1Q9CY50 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Ssr1Q9CY50 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ssr1Q9CY50 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ssr1Q9CY50 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.51■■□□□ 1.84
Ssr1Q9CY50 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
Ssr1Q9CY50 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Ssr1Q9CY50 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ssr1Q9CY50 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ssr1Q9CY50 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ssr1Q9CY50 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ssr1Q9CY50 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ssr1Q9CY50 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ssr1Q9CY50 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ssr1Q9CY50 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Ssr1Q9CY50 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ssr1Q9CY50 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.48■■□□□ 1.83
Ssr1Q9CY50 Amer2-203ENSMUST00000225247 2662 ntBASIC26.48■■□□□ 1.83
Ssr1Q9CY50 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ssr1Q9CY50 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ssr1Q9CY50 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ssr1Q9CY50 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
Ssr1Q9CY50 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.46■■□□□ 1.83
Ssr1Q9CY50 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ssr1Q9CY50 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Ssr1Q9CY50 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ssr1Q9CY50 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.44■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms