Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
KRTAP3-3Q9BYR6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC16.53■□□□□ 0.24
KRTAP3-3Q9BYR6 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.53■□□□□ 0.24
KRTAP3-3Q9BYR6 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC16.52■□□□□ 0.24
KRTAP3-3Q9BYR6 AC132872.1-201ENST00000566986 1195 ntBASIC16.52■□□□□ 0.24
KRTAP3-3Q9BYR6 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC16.51■□□□□ 0.23
KRTAP3-3Q9BYR6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.51■□□□□ 0.23
KRTAP3-3Q9BYR6 AC068313.1-201ENST00000604028 1008 ntBASIC16.51■□□□□ 0.23
KRTAP3-3Q9BYR6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.5■□□□□ 0.23
KRTAP3-3Q9BYR6 AL355816.2-201ENST00000610049 647 ntBASIC16.5■□□□□ 0.23
KRTAP3-3Q9BYR6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRTAP3-3Q9BYR6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRTAP3-3Q9BYR6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRTAP3-3Q9BYR6 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRTAP3-3Q9BYR6 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC16.48■□□□□ 0.23
KRTAP3-3Q9BYR6 AC107308.1-201ENST00000615897 301 ntBASIC16.48■□□□□ 0.23
KRTAP3-3Q9BYR6 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC16.47■□□□□ 0.23
KRTAP3-3Q9BYR6 AL356094.1-201ENST00000624663 1212 ntBASIC16.46■□□□□ 0.23
KRTAP3-3Q9BYR6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRTAP3-3Q9BYR6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRTAP3-3Q9BYR6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC16.44■□□□□ 0.22
KRTAP3-3Q9BYR6 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRTAP3-3Q9BYR6 AC004908.3-201ENST00000610248 625 ntBASIC16.43■□□□□ 0.22
KRTAP3-3Q9BYR6 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.43■□□□□ 0.22
KRTAP3-3Q9BYR6 HNRNPA1P23-201ENST00000491091 1133 ntBASIC16.42■□□□□ 0.22
KRTAP3-3Q9BYR6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRTAP3-3Q9BYR6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRTAP3-3Q9BYR6 AL109620.1-201ENST00000618738 1197 ntBASIC16.42■□□□□ 0.22
KRTAP3-3Q9BYR6 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC16.41■□□□□ 0.22
KRTAP3-3Q9BYR6 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC16.41■□□□□ 0.22
KRTAP3-3Q9BYR6 AL355578.1-201ENST00000607405 1328 ntBASIC16.41■□□□□ 0.22
KRTAP3-3Q9BYR6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC16.4■□□□□ 0.22
KRTAP3-3Q9BYR6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRTAP3-3Q9BYR6 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC16.4■□□□□ 0.22
KRTAP3-3Q9BYR6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRTAP3-3Q9BYR6 AC092953.2-201ENST00000608000 699 ntBASIC16.39■□□□□ 0.21
KRTAP3-3Q9BYR6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC16.38■□□□□ 0.21
KRTAP3-3Q9BYR6 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC16.38■□□□□ 0.21
KRTAP3-3Q9BYR6 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
KRTAP3-3Q9BYR6 ADAM3B-201ENST00000569937 840 ntBASIC16.38■□□□□ 0.21
KRTAP3-3Q9BYR6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRTAP3-3Q9BYR6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRTAP3-3Q9BYR6 PSMC1P2-201ENST00000423961 1204 ntBASIC16.37■□□□□ 0.21
KRTAP3-3Q9BYR6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC16.37■□□□□ 0.21
KRTAP3-3Q9BYR6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
KRTAP3-3Q9BYR6 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC16.36■□□□□ 0.21
KRTAP3-3Q9BYR6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.36■□□□□ 0.21
KRTAP3-3Q9BYR6 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC16.36■□□□□ 0.21
KRTAP3-3Q9BYR6 AL035696.2-201ENST00000407941 709 ntBASIC16.35■□□□□ 0.21
KRTAP3-3Q9BYR6 AL691447.1-201ENST00000419456 387 ntBASIC16.35■□□□□ 0.21
KRTAP3-3Q9BYR6 RPS6P14-201ENST00000425165 719 ntBASIC16.35■□□□□ 0.21
KRTAP3-3Q9BYR6 AC005332.10-201ENST00000612725 619 ntBASIC16.35■□□□□ 0.21
KRTAP3-3Q9BYR6 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC16.34■□□□□ 0.21
KRTAP3-3Q9BYR6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRTAP3-3Q9BYR6 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRTAP3-3Q9BYR6 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC16.32■□□□□ 0.2
KRTAP3-3Q9BYR6 AC083964.1-201ENST00000607549 630 ntBASIC16.32■□□□□ 0.2
KRTAP3-3Q9BYR6 AC084782.3-201ENST00000612282 578 ntBASIC16.32■□□□□ 0.2
KRTAP3-3Q9BYR6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC16.31■□□□□ 0.2
KRTAP3-3Q9BYR6 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRTAP3-3Q9BYR6 AC090950.1-202ENST00000605733 644 ntBASIC16.3■□□□□ 0.2
KRTAP3-3Q9BYR6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC16.3■□□□□ 0.2
KRTAP3-3Q9BYR6 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KRTAP3-3Q9BYR6 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC16.28■□□□□ 0.2
KRTAP3-3Q9BYR6 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC16.28■□□□□ 0.2
KRTAP3-3Q9BYR6 ZNF736P11Y-201ENST00000442535 1213 ntBASIC16.27■□□□□ 0.2
KRTAP3-3Q9BYR6 ZNF736P12Y-201ENST00000443152 1243 ntBASIC16.27■□□□□ 0.2
KRTAP3-3Q9BYR6 ZNF736P4Y-201ENST00000454995 1243 ntBASIC16.27■□□□□ 0.2
KRTAP3-3Q9BYR6 NPM1P28-201ENST00000492269 840 ntBASIC16.27■□□□□ 0.2
KRTAP3-3Q9BYR6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRTAP3-3Q9BYR6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRTAP3-3Q9BYR6 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC16.26■□□□□ 0.19
KRTAP3-3Q9BYR6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC16.26■□□□□ 0.19
KRTAP3-3Q9BYR6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC16.26■□□□□ 0.19
KRTAP3-3Q9BYR6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.26■□□□□ 0.19
KRTAP3-3Q9BYR6 AC025165.5-201ENST00000602802 578 ntBASIC16.26■□□□□ 0.19
KRTAP3-3Q9BYR6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRTAP3-3Q9BYR6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRTAP3-3Q9BYR6 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRTAP3-3Q9BYR6 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC16.25■□□□□ 0.19
KRTAP3-3Q9BYR6 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRTAP3-3Q9BYR6 AC004777.1-201ENST00000624317 287 ntBASIC16.25■□□□□ 0.19
KRTAP3-3Q9BYR6 AC027348.2-201ENST00000624375 642 ntBASIC16.25■□□□□ 0.19
KRTAP3-3Q9BYR6 MTND1P31-201ENST00000449206 961 ntBASIC16.24■□□□□ 0.19
KRTAP3-3Q9BYR6 AC022960.2-201ENST00000616300 666 ntBASIC16.24■□□□□ 0.19
KRTAP3-3Q9BYR6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRTAP3-3Q9BYR6 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC16.23■□□□□ 0.19
KRTAP3-3Q9BYR6 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC16.23■□□□□ 0.19
KRTAP3-3Q9BYR6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.22■□□□□ 0.19
KRTAP3-3Q9BYR6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.22■□□□□ 0.19
KRTAP3-3Q9BYR6 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC16.22■□□□□ 0.19
KRTAP3-3Q9BYR6 AL031058.1-201ENST00000561592 888 ntBASIC16.22■□□□□ 0.19
KRTAP3-3Q9BYR6 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC16.22■□□□□ 0.19
KRTAP3-3Q9BYR6 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC16.21■□□□□ 0.19
KRTAP3-3Q9BYR6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC16.21■□□□□ 0.19
KRTAP3-3Q9BYR6 AC087752.4-201ENST00000605911 462 ntBASIC16.21■□□□□ 0.19
KRTAP3-3Q9BYR6 AC021321.1-201ENST00000607397 1113 ntBASIC16.21■□□□□ 0.19
KRTAP3-3Q9BYR6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
KRTAP3-3Q9BYR6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.19■□□□□ 0.18
KRTAP3-3Q9BYR6 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms