Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Pcdh15Q99PJ1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30,47■■■□□ 2,47
Pcdh15Q99PJ1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30,47■■■□□ 2,47
Pcdh15Q99PJ1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
Pcdh15Q99PJ1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Pcdh15Q99PJ1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Pcdh15Q99PJ1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Pcdh15Q99PJ1 Gm43863-201ENSMUST00000203822 1192 ntBASIC30,45■■■□□ 2,46
Pcdh15Q99PJ1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Pcdh15Q99PJ1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Pcdh15Q99PJ1 Gm42809-201ENSMUST00000198429 1138 ntBASIC30,4■■■□□ 2,46
Pcdh15Q99PJ1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30,39■■■□□ 2,46
Pcdh15Q99PJ1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Pcdh15Q99PJ1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30,38■■■□□ 2,45
Pcdh15Q99PJ1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30,37■■■□□ 2,45
Pcdh15Q99PJ1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30,37■■■□□ 2,45
Pcdh15Q99PJ1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30,35■■■□□ 2,45
Pcdh15Q99PJ1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Pcdh15Q99PJ1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30,33■■■□□ 2,45
Pcdh15Q99PJ1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30,33■■■□□ 2,45
Pcdh15Q99PJ1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Pcdh15Q99PJ1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Pcdh15Q99PJ1 AC157572.2-201ENSMUST00000226970 908 ntBASIC30,32■■■□□ 2,44
Pcdh15Q99PJ1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Pcdh15Q99PJ1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30,31■■■□□ 2,44
Pcdh15Q99PJ1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Pcdh15Q99PJ1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30,28■■■□□ 2,44
Pcdh15Q99PJ1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Pcdh15Q99PJ1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,44
Pcdh15Q99PJ1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,43
Pcdh15Q99PJ1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Pcdh15Q99PJ1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30,24■■■□□ 2,43
Pcdh15Q99PJ1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Pcdh15Q99PJ1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30,2■■■□□ 2,42
Pcdh15Q99PJ1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Pcdh15Q99PJ1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30,17■■■□□ 2,42
Pcdh15Q99PJ1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30,16■■■□□ 2,42
Pcdh15Q99PJ1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30,15■■■□□ 2,42
Pcdh15Q99PJ1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30,13■■■□□ 2,41
Pcdh15Q99PJ1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30,13■■■□□ 2,41
Pcdh15Q99PJ1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Pcdh15Q99PJ1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Pcdh15Q99PJ1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Pcdh15Q99PJ1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30,08■■■□□ 2,41
Pcdh15Q99PJ1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30,05■■■□□ 2,4
Pcdh15Q99PJ1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30,04■■■□□ 2,4
Pcdh15Q99PJ1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30,04■■■□□ 2,4
Pcdh15Q99PJ1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Pcdh15Q99PJ1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Pcdh15Q99PJ1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30,03■■■□□ 2,4
Pcdh15Q99PJ1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30,03■■■□□ 2,4
Pcdh15Q99PJ1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30,02■■■□□ 2,4
Pcdh15Q99PJ1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,02■■■□□ 2,4
Pcdh15Q99PJ1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30,01■■■□□ 2,39
Pcdh15Q99PJ1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30■■■□□ 2,39
Pcdh15Q99PJ1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29,99■■■□□ 2,39
Pcdh15Q99PJ1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29,98■■■□□ 2,39
Pcdh15Q99PJ1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29,98■■■□□ 2,39
Pcdh15Q99PJ1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29,96■■■□□ 2,39
Pcdh15Q99PJ1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,39
Pcdh15Q99PJ1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29,94■■■□□ 2,38
Pcdh15Q99PJ1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Pcdh15Q99PJ1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Pcdh15Q99PJ1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29,93■■■□□ 2,38
Pcdh15Q99PJ1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29,93■■■□□ 2,38
Pcdh15Q99PJ1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29,92■■■□□ 2,38
Pcdh15Q99PJ1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29,91■■■□□ 2,38
Pcdh15Q99PJ1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29,9■■■□□ 2,38
Pcdh15Q99PJ1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29,9■■■□□ 2,38
Pcdh15Q99PJ1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29,9■■■□□ 2,38
Pcdh15Q99PJ1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29,89■■■□□ 2,38
Pcdh15Q99PJ1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29,89■■■□□ 2,38
Pcdh15Q99PJ1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29,89■■■□□ 2,38
Pcdh15Q99PJ1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29,88■■■□□ 2,37
Pcdh15Q99PJ1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29,87■■■□□ 2,37
Pcdh15Q99PJ1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29,87■■■□□ 2,37
Pcdh15Q99PJ1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Pcdh15Q99PJ1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29,86■■■□□ 2,37
Pcdh15Q99PJ1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29,86■■■□□ 2,37
Pcdh15Q99PJ1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29,86■■■□□ 2,37
Pcdh15Q99PJ1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29,85■■■□□ 2,37
Pcdh15Q99PJ1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29,84■■■□□ 2,37
Pcdh15Q99PJ1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Pcdh15Q99PJ1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29,82■■■□□ 2,36
Pcdh15Q99PJ1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29,81■■■□□ 2,36
Pcdh15Q99PJ1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Pcdh15Q99PJ1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29,8■■■□□ 2,36
Pcdh15Q99PJ1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29,8■■■□□ 2,36
Pcdh15Q99PJ1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29,79■■■□□ 2,36
Pcdh15Q99PJ1 Gm7432-201ENSMUST00000210343 879 ntBASIC29,79■■■□□ 2,36
Pcdh15Q99PJ1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29,77■■■□□ 2,36
Pcdh15Q99PJ1 Nkain2-201ENSMUST00000092602 558 ntBASIC29,77■■■□□ 2,36
Pcdh15Q99PJ1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29,77■■■□□ 2,36
Pcdh15Q99PJ1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Pcdh15Q99PJ1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29,77■■■□□ 2,36
Pcdh15Q99PJ1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,36
Pcdh15Q99PJ1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29,76■■■□□ 2,35
Pcdh15Q99PJ1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC29,76■■■□□ 2,35
Pcdh15Q99PJ1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Pcdh15Q99PJ1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29,74■■■□□ 2,35
Retrieved 100 of 76,532 protein–RNA pairs in 31,9 ms