Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf111Q99ML9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf111Q99ML9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf111Q99ML9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf111Q99ML9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf111Q99ML9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf111Q99ML9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf111Q99ML9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf111Q99ML9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf111Q99ML9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rnf111Q99ML9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf111Q99ML9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf111Q99ML9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf111Q99ML9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf111Q99ML9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf111Q99ML9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.42■■□□□ 1.5
Rnf111Q99ML9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf111Q99ML9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Rnf111Q99ML9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
Rnf111Q99ML9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf111Q99ML9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf111Q99ML9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf111Q99ML9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf111Q99ML9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf111Q99ML9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf111Q99ML9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf111Q99ML9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf111Q99ML9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Rnf111Q99ML9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rnf111Q99ML9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.33■■□□□ 1.49
Rnf111Q99ML9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
Rnf111Q99ML9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Rnf111Q99ML9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf111Q99ML9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnf111Q99ML9 Gm24804-201ENSMUST00000174982 85 ntBASIC24.3■■□□□ 1.48
Rnf111Q99ML9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Rnf111Q99ML9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rnf111Q99ML9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Rnf111Q99ML9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rnf111Q99ML9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.28■■□□□ 1.48
Rnf111Q99ML9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf111Q99ML9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf111Q99ML9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf111Q99ML9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf111Q99ML9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.26■■□□□ 1.47
Rnf111Q99ML9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Rnf111Q99ML9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf111Q99ML9 Peli2-204ENSMUST00000226513 1320 ntBASIC24.23■■□□□ 1.47
Rnf111Q99ML9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf111Q99ML9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf111Q99ML9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf111Q99ML9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.19■■□□□ 1.46
Rnf111Q99ML9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.19■■□□□ 1.46
Rnf111Q99ML9 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.18■■□□□ 1.46
Rnf111Q99ML9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf111Q99ML9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf111Q99ML9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf111Q99ML9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Rnf111Q99ML9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf111Q99ML9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rnf111Q99ML9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf111Q99ML9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf111Q99ML9 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.11■■□□□ 1.45
Rnf111Q99ML9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rnf111Q99ML9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.1■■□□□ 1.45
Rnf111Q99ML9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rnf111Q99ML9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf111Q99ML9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rnf111Q99ML9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Rnf111Q99ML9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf111Q99ML9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Rnf111Q99ML9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf111Q99ML9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf111Q99ML9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf111Q99ML9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf111Q99ML9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf111Q99ML9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf111Q99ML9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf111Q99ML9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf111Q99ML9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.03■■□□□ 1.44
Rnf111Q99ML9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.03■■□□□ 1.44
Rnf111Q99ML9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Rnf111Q99ML9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.03■■□□□ 1.44
Rnf111Q99ML9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf111Q99ML9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf111Q99ML9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.02■■□□□ 1.44
Rnf111Q99ML9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf111Q99ML9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.02■■□□□ 1.44
Rnf111Q99ML9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf111Q99ML9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
Rnf111Q99ML9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Rnf111Q99ML9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf111Q99ML9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Rnf111Q99ML9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf111Q99ML9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf111Q99ML9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.98■■□□□ 1.43
Rnf111Q99ML9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf111Q99ML9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf111Q99ML9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf111Q99ML9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 132.9 ms