Protein–RNA interactions for Protein: Q920N1

Odf3, Outer dense fiber protein 3, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf3Q920N1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Odf3Q920N1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.97■□□□□ 0.63
Odf3Q920N1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Odf3Q920N1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Odf3Q920N1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Odf3Q920N1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Odf3Q920N1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Odf3Q920N1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Odf3Q920N1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Odf3Q920N1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Odf3Q920N1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Odf3Q920N1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Odf3Q920N1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Odf3Q920N1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
Odf3Q920N1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Odf3Q920N1 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.93■□□□□ 0.62
Odf3Q920N1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Odf3Q920N1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Odf3Q920N1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Odf3Q920N1 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.92■□□□□ 0.62
Odf3Q920N1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Odf3Q920N1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Odf3Q920N1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Odf3Q920N1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Odf3Q920N1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Odf3Q920N1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Odf3Q920N1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Odf3Q920N1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Odf3Q920N1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Odf3Q920N1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Odf3Q920N1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.88■□□□□ 0.61
Odf3Q920N1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.87■□□□□ 0.61
Odf3Q920N1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Odf3Q920N1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Odf3Q920N1 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.85■□□□□ 0.61
Odf3Q920N1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.85■□□□□ 0.61
Odf3Q920N1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Odf3Q920N1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Odf3Q920N1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Odf3Q920N1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Odf3Q920N1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Odf3Q920N1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Odf3Q920N1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Odf3Q920N1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Odf3Q920N1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Odf3Q920N1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Odf3Q920N1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Odf3Q920N1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Odf3Q920N1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Odf3Q920N1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Odf3Q920N1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Odf3Q920N1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Odf3Q920N1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Odf3Q920N1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Odf3Q920N1 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.78■□□□□ 0.6
Odf3Q920N1 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.77■□□□□ 0.6
Odf3Q920N1 Gm24804-201ENSMUST00000174982 85 ntBASIC18.77■□□□□ 0.6
Odf3Q920N1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Odf3Q920N1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Odf3Q920N1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Odf3Q920N1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Odf3Q920N1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Odf3Q920N1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Odf3Q920N1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Odf3Q920N1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Odf3Q920N1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Odf3Q920N1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Odf3Q920N1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf3Q920N1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Odf3Q920N1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Odf3Q920N1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Odf3Q920N1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.7■□□□□ 0.58
Odf3Q920N1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Odf3Q920N1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Odf3Q920N1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Odf3Q920N1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Odf3Q920N1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Odf3Q920N1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Odf3Q920N1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Odf3Q920N1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Odf3Q920N1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Odf3Q920N1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Odf3Q920N1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf3Q920N1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Odf3Q920N1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Odf3Q920N1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Odf3Q920N1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.63■□□□□ 0.57
Odf3Q920N1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Odf3Q920N1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.61■□□□□ 0.57
Odf3Q920N1 Gm16148-201ENSMUST00000119653 893 ntBASIC18.61■□□□□ 0.57
Odf3Q920N1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Odf3Q920N1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Odf3Q920N1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Odf3Q920N1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Odf3Q920N1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Odf3Q920N1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Odf3Q920N1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Odf3Q920N1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Odf3Q920N1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Odf3Q920N1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms