Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25,12■■□□□ 1,61
Pcdhb3Q91XZ7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25,12■■□□□ 1,61
Pcdhb3Q91XZ7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25,1■■□□□ 1,61
Pcdhb3Q91XZ7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Pcdhb3Q91XZ7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25,09■■□□□ 1,61
Pcdhb3Q91XZ7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Pcdhb3Q91XZ7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25,07■■□□□ 1,6
Pcdhb3Q91XZ7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25,06■■□□□ 1,6
Pcdhb3Q91XZ7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,06■■□□□ 1,6
Pcdhb3Q91XZ7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25,06■■□□□ 1,6
Pcdhb3Q91XZ7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25,05■■□□□ 1,6
Pcdhb3Q91XZ7 Gm27322-201ENSMUST00000184007 104 ntBASIC25,05■■□□□ 1,6
Pcdhb3Q91XZ7 Fezf2-202ENSMUST00000224023 1917 ntBASIC25,05■■□□□ 1,6
Pcdhb3Q91XZ7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25,04■■□□□ 1,6
Pcdhb3Q91XZ7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25,03■■□□□ 1,6
Pcdhb3Q91XZ7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,02■■□□□ 1,6
Pcdhb3Q91XZ7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25,02■■□□□ 1,6
Pcdhb3Q91XZ7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24,99■■□□□ 1,59
Pcdhb3Q91XZ7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24,99■■□□□ 1,59
Pcdhb3Q91XZ7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Pcdhb3Q91XZ7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24,99■■□□□ 1,59
Pcdhb3Q91XZ7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24,98■■□□□ 1,59
Pcdhb3Q91XZ7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24,98■■□□□ 1,59
Pcdhb3Q91XZ7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Pcdhb3Q91XZ7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24,97■■□□□ 1,59
Pcdhb3Q91XZ7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Pcdhb3Q91XZ7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,59
Pcdhb3Q91XZ7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,58
Pcdhb3Q91XZ7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24,95■■□□□ 1,58
Pcdhb3Q91XZ7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24,93■■□□□ 1,58
Pcdhb3Q91XZ7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24,92■■□□□ 1,58
Pcdhb3Q91XZ7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24,92■■□□□ 1,58
Pcdhb3Q91XZ7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24,92■■□□□ 1,58
Pcdhb3Q91XZ7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24,92■■□□□ 1,58
Pcdhb3Q91XZ7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Pcdhb3Q91XZ7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24,91■■□□□ 1,58
Pcdhb3Q91XZ7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24,9■■□□□ 1,58
Pcdhb3Q91XZ7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24,89■■□□□ 1,57
Pcdhb3Q91XZ7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24,88■■□□□ 1,57
Pcdhb3Q91XZ7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24,88■■□□□ 1,57
Pcdhb3Q91XZ7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24,87■■□□□ 1,57
Pcdhb3Q91XZ7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24,86■■□□□ 1,57
Pcdhb3Q91XZ7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24,84■■□□□ 1,57
Pcdhb3Q91XZ7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24,84■■□□□ 1,57
Pcdhb3Q91XZ7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24,81■■□□□ 1,56
Pcdhb3Q91XZ7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
Pcdhb3Q91XZ7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24,81■■□□□ 1,56
Pcdhb3Q91XZ7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
Pcdhb3Q91XZ7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Pcdhb3Q91XZ7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24,79■■□□□ 1,56
Pcdhb3Q91XZ7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24,77■■□□□ 1,56
Pcdhb3Q91XZ7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24,77■■□□□ 1,56
Pcdhb3Q91XZ7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24,77■■□□□ 1,56
Pcdhb3Q91XZ7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24,76■■□□□ 1,55
Pcdhb3Q91XZ7 AL845457.1-201ENSMUST00000197244 68 ntBASIC24,76■■□□□ 1,55
Pcdhb3Q91XZ7 Gm24804-201ENSMUST00000174982 85 ntBASIC24,74■■□□□ 1,55
Pcdhb3Q91XZ7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24,74■■□□□ 1,55
Pcdhb3Q91XZ7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24,73■■□□□ 1,55
Pcdhb3Q91XZ7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24,71■■□□□ 1,55
Pcdhb3Q91XZ7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24,71■■□□□ 1,55
Pcdhb3Q91XZ7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24,7■■□□□ 1,54
Pcdhb3Q91XZ7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24,7■■□□□ 1,54
Pcdhb3Q91XZ7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24,69■■□□□ 1,54
Pcdhb3Q91XZ7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24,68■■□□□ 1,54
Pcdhb3Q91XZ7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24,67■■□□□ 1,54
Pcdhb3Q91XZ7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24,67■■□□□ 1,54
Pcdhb3Q91XZ7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Pcdhb3Q91XZ7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24,65■■□□□ 1,54
Pcdhb3Q91XZ7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24,64■■□□□ 1,54
Pcdhb3Q91XZ7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,54
Pcdhb3Q91XZ7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24,64■■□□□ 1,53
Pcdhb3Q91XZ7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24,64■■□□□ 1,53
Pcdhb3Q91XZ7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24,63■■□□□ 1,53
Pcdhb3Q91XZ7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24,63■■□□□ 1,53
Pcdhb3Q91XZ7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24,61■■□□□ 1,53
Pcdhb3Q91XZ7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
Pcdhb3Q91XZ7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24,61■■□□□ 1,53
Pcdhb3Q91XZ7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24,61■■□□□ 1,53
Pcdhb3Q91XZ7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
Pcdhb3Q91XZ7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24,6■■□□□ 1,53
Pcdhb3Q91XZ7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24,6■■□□□ 1,53
Pcdhb3Q91XZ7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Pcdhb3Q91XZ7 AC166822.3-201ENSMUST00000227394 661 ntBASIC24,58■■□□□ 1,53
Pcdhb3Q91XZ7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24,57■■□□□ 1,52
Pcdhb3Q91XZ7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24,57■■□□□ 1,52
Pcdhb3Q91XZ7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24,57■■□□□ 1,52
Pcdhb3Q91XZ7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24,56■■□□□ 1,52
Pcdhb3Q91XZ7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24,54■■□□□ 1,52
Pcdhb3Q91XZ7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24,53■■□□□ 1,52
Pcdhb3Q91XZ7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24,53■■□□□ 1,52
Pcdhb3Q91XZ7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Pcdhb3Q91XZ7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24,51■■□□□ 1,51
Pcdhb3Q91XZ7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24,51■■□□□ 1,51
Pcdhb3Q91XZ7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24,51■■□□□ 1,51
Pcdhb3Q91XZ7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Pcdhb3Q91XZ7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24,5■■□□□ 1,51
Pcdhb3Q91XZ7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Pcdhb3Q91XZ7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24,48■■□□□ 1,51
Pcdhb3Q91XZ7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
Pcdhb3Q91XZ7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24,44■■□□□ 1,5
Retrieved 100 of 76,532 protein–RNA pairs in 39,8 ms