Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhga11Q91XY8 Peli2-204ENSMUST00000226513 1320 ntBASIC24.25■■□□□ 1.47
Pcdhga11Q91XY8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhga11Q91XY8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Pcdhga11Q91XY8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.24■■□□□ 1.47
Pcdhga11Q91XY8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.23■■□□□ 1.47
Pcdhga11Q91XY8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhga11Q91XY8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhga11Q91XY8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhga11Q91XY8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.21■■□□□ 1.47
Pcdhga11Q91XY8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Pcdhga11Q91XY8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhga11Q91XY8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhga11Q91XY8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhga11Q91XY8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhga11Q91XY8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhga11Q91XY8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhga11Q91XY8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhga11Q91XY8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhga11Q91XY8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Pcdhga11Q91XY8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Pcdhga11Q91XY8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhga11Q91XY8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Pcdhga11Q91XY8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhga11Q91XY8 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.12■■□□□ 1.45
Pcdhga11Q91XY8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhga11Q91XY8 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.11■■□□□ 1.45
Pcdhga11Q91XY8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga11Q91XY8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga11Q91XY8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga11Q91XY8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga11Q91XY8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga11Q91XY8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga11Q91XY8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Pcdhga11Q91XY8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Pcdhga11Q91XY8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhga11Q91XY8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga11Q91XY8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.05■■□□□ 1.44
Pcdhga11Q91XY8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga11Q91XY8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhga11Q91XY8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhga11Q91XY8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhga11Q91XY8 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.03■■□□□ 1.44
Pcdhga11Q91XY8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga11Q91XY8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga11Q91XY8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga11Q91XY8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga11Q91XY8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Pcdhga11Q91XY8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Pcdhga11Q91XY8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Pcdhga11Q91XY8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhga11Q91XY8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.99■■□□□ 1.43
Pcdhga11Q91XY8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Pcdhga11Q91XY8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhga11Q91XY8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhga11Q91XY8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhga11Q91XY8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhga11Q91XY8 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.97■■□□□ 1.43
Pcdhga11Q91XY8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Pcdhga11Q91XY8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhga11Q91XY8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhga11Q91XY8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhga11Q91XY8 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.95■■□□□ 1.42
Pcdhga11Q91XY8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhga11Q91XY8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhga11Q91XY8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcdhga11Q91XY8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.94■■□□□ 1.42
Pcdhga11Q91XY8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga11Q91XY8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga11Q91XY8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga11Q91XY8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhga11Q91XY8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga11Q91XY8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga11Q91XY8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga11Q91XY8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga11Q91XY8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Pcdhga11Q91XY8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Pcdhga11Q91XY8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.88■■□□□ 1.41
Pcdhga11Q91XY8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Pcdhga11Q91XY8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhga11Q91XY8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhga11Q91XY8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhga11Q91XY8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhga11Q91XY8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhga11Q91XY8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhga11Q91XY8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhga11Q91XY8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhga11Q91XY8 Zfp131-205ENSMUST00000223812 663 ntBASIC23.82■■□□□ 1.4
Pcdhga11Q91XY8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhga11Q91XY8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga11Q91XY8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga11Q91XY8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Pcdhga11Q91XY8 Gm16148-201ENSMUST00000119653 893 ntBASIC23.79■■□□□ 1.4
Pcdhga11Q91XY8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhga11Q91XY8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhga11Q91XY8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhga11Q91XY8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhga11Q91XY8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhga11Q91XY8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.73■■□□□ 1.39
Pcdhga11Q91XY8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms