Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26,55■■□□□ 1,84
SfpqQ8VIJ6 Gm27322-201ENSMUST00000184007 104 ntBASIC26,54■■□□□ 1,84
SfpqQ8VIJ6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
SfpqQ8VIJ6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26,53■■□□□ 1,84
SfpqQ8VIJ6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
SfpqQ8VIJ6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
SfpqQ8VIJ6 Gm17082-201ENSMUST00000166043 1091 ntBASIC26,51■■□□□ 1,83
SfpqQ8VIJ6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
SfpqQ8VIJ6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26,5■■□□□ 1,83
SfpqQ8VIJ6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
SfpqQ8VIJ6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26,49■■□□□ 1,83
SfpqQ8VIJ6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26,49■■□□□ 1,83
SfpqQ8VIJ6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26,49■■□□□ 1,83
SfpqQ8VIJ6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26,48■■□□□ 1,83
SfpqQ8VIJ6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26,47■■□□□ 1,83
SfpqQ8VIJ6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
SfpqQ8VIJ6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26,44■■□□□ 1,82
SfpqQ8VIJ6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26,44■■□□□ 1,82
SfpqQ8VIJ6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
SfpqQ8VIJ6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26,43■■□□□ 1,82
SfpqQ8VIJ6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26,43■■□□□ 1,82
SfpqQ8VIJ6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26,42■■□□□ 1,82
SfpqQ8VIJ6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26,42■■□□□ 1,82
SfpqQ8VIJ6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26,41■■□□□ 1,82
SfpqQ8VIJ6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
SfpqQ8VIJ6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26,4■■□□□ 1,82
SfpqQ8VIJ6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26,4■■□□□ 1,82
SfpqQ8VIJ6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26,39■■□□□ 1,82
SfpqQ8VIJ6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26,39■■□□□ 1,82
SfpqQ8VIJ6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26,39■■□□□ 1,81
SfpqQ8VIJ6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,81
SfpqQ8VIJ6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,81
SfpqQ8VIJ6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
SfpqQ8VIJ6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26,38■■□□□ 1,81
SfpqQ8VIJ6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26,38■■□□□ 1,81
SfpqQ8VIJ6 Amer2-203ENSMUST00000225247 2662 ntBASIC26,38■■□□□ 1,81
SfpqQ8VIJ6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26,37■■□□□ 1,81
SfpqQ8VIJ6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26,37■■□□□ 1,81
SfpqQ8VIJ6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26,36■■□□□ 1,81
SfpqQ8VIJ6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
SfpqQ8VIJ6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
SfpqQ8VIJ6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
SfpqQ8VIJ6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26,33■■□□□ 1,81
SfpqQ8VIJ6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26,32■■□□□ 1,8
SfpqQ8VIJ6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26,32■■□□□ 1,8
SfpqQ8VIJ6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
SfpqQ8VIJ6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26,31■■□□□ 1,8
SfpqQ8VIJ6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26,28■■□□□ 1,8
SfpqQ8VIJ6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26,28■■□□□ 1,8
SfpqQ8VIJ6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26,27■■□□□ 1,8
SfpqQ8VIJ6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26,25■■□□□ 1,79
SfpqQ8VIJ6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26,25■■□□□ 1,79
SfpqQ8VIJ6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26,24■■□□□ 1,79
SfpqQ8VIJ6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26,24■■□□□ 1,79
SfpqQ8VIJ6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26,24■■□□□ 1,79
SfpqQ8VIJ6 Gm30346-201ENSMUST00000218641 1699 ntBASIC26,24■■□□□ 1,79
SfpqQ8VIJ6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26,24■■□□□ 1,79
SfpqQ8VIJ6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26,23■■□□□ 1,79
SfpqQ8VIJ6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
SfpqQ8VIJ6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
SfpqQ8VIJ6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26,21■■□□□ 1,79
SfpqQ8VIJ6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
SfpqQ8VIJ6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
SfpqQ8VIJ6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26,21■■□□□ 1,79
SfpqQ8VIJ6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,79
SfpqQ8VIJ6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26,2■■□□□ 1,78
SfpqQ8VIJ6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26,2■■□□□ 1,78
SfpqQ8VIJ6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26,18■■□□□ 1,78
SfpqQ8VIJ6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26,18■■□□□ 1,78
SfpqQ8VIJ6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26,18■■□□□ 1,78
SfpqQ8VIJ6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26,18■■□□□ 1,78
SfpqQ8VIJ6 Fezf2-202ENSMUST00000224023 1917 ntBASIC26,18■■□□□ 1,78
SfpqQ8VIJ6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26,17■■□□□ 1,78
SfpqQ8VIJ6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
SfpqQ8VIJ6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26,15■■□□□ 1,78
SfpqQ8VIJ6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26,14■■□□□ 1,78
SfpqQ8VIJ6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26,14■■□□□ 1,78
SfpqQ8VIJ6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26,14■■□□□ 1,78
SfpqQ8VIJ6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26,14■■□□□ 1,77
SfpqQ8VIJ6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
SfpqQ8VIJ6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26,12■■□□□ 1,77
SfpqQ8VIJ6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
SfpqQ8VIJ6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26,11■■□□□ 1,77
SfpqQ8VIJ6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
SfpqQ8VIJ6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26,1■■□□□ 1,77
SfpqQ8VIJ6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26,1■■□□□ 1,77
SfpqQ8VIJ6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
SfpqQ8VIJ6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,77
SfpqQ8VIJ6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
SfpqQ8VIJ6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26,07■■□□□ 1,76
SfpqQ8VIJ6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26,07■■□□□ 1,76
SfpqQ8VIJ6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
SfpqQ8VIJ6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26,06■■□□□ 1,76
SfpqQ8VIJ6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26,05■■□□□ 1,76
SfpqQ8VIJ6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
SfpqQ8VIJ6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26,04■■□□□ 1,76
SfpqQ8VIJ6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26,04■■□□□ 1,76
SfpqQ8VIJ6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26,03■■□□□ 1,76
SfpqQ8VIJ6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26,03■■□□□ 1,76
SfpqQ8VIJ6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Retrieved 100 of 76,532 protein–RNA pairs in 12,5 ms