Protein–RNA interactions for Protein: Q8R526

Pkd1l1, Polycystic kidney disease protein 1-like 1, mousemouse

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l1Q8R526 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pkd1l1Q8R526 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.09■□□□□ 0.65
Pkd1l1Q8R526 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pkd1l1Q8R526 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.07■□□□□ 0.64
Pkd1l1Q8R526 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.06■□□□□ 0.64
Pkd1l1Q8R526 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pkd1l1Q8R526 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pkd1l1Q8R526 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.04■□□□□ 0.64
Pkd1l1Q8R526 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.04■□□□□ 0.64
Pkd1l1Q8R526 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pkd1l1Q8R526 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pkd1l1Q8R526 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pkd1l1Q8R526 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pkd1l1Q8R526 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pkd1l1Q8R526 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pkd1l1Q8R526 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pkd1l1Q8R526 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pkd1l1Q8R526 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pkd1l1Q8R526 Gm11599-201ENSMUST00000118720 878 ntBASIC18.97■□□□□ 0.63
Pkd1l1Q8R526 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pkd1l1Q8R526 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pkd1l1Q8R526 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pkd1l1Q8R526 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.96■□□□□ 0.63
Pkd1l1Q8R526 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.96■□□□□ 0.63
Pkd1l1Q8R526 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pkd1l1Q8R526 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pkd1l1Q8R526 Mipep-204ENSMUST00000225043 1548 ntBASIC18.94■□□□□ 0.62
Pkd1l1Q8R526 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pkd1l1Q8R526 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pkd1l1Q8R526 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l1Q8R526 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l1Q8R526 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pkd1l1Q8R526 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pkd1l1Q8R526 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pkd1l1Q8R526 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pkd1l1Q8R526 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.89■□□□□ 0.61
Pkd1l1Q8R526 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pkd1l1Q8R526 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pkd1l1Q8R526 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l1Q8R526 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.87■□□□□ 0.61
Pkd1l1Q8R526 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l1Q8R526 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkd1l1Q8R526 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkd1l1Q8R526 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkd1l1Q8R526 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkd1l1Q8R526 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkd1l1Q8R526 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pkd1l1Q8R526 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkd1l1Q8R526 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1l1Q8R526 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1l1Q8R526 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkd1l1Q8R526 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkd1l1Q8R526 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkd1l1Q8R526 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pkd1l1Q8R526 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pkd1l1Q8R526 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.79■□□□□ 0.6
Pkd1l1Q8R526 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkd1l1Q8R526 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pkd1l1Q8R526 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.78■□□□□ 0.6
Pkd1l1Q8R526 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pkd1l1Q8R526 Gm22567-201ENSMUST00000175542 342 ntBASIC18.77■□□□□ 0.6
Pkd1l1Q8R526 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pkd1l1Q8R526 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pkd1l1Q8R526 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pkd1l1Q8R526 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.76■□□□□ 0.59
Pkd1l1Q8R526 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pkd1l1Q8R526 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.73■□□□□ 0.59
Pkd1l1Q8R526 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pkd1l1Q8R526 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pkd1l1Q8R526 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l1Q8R526 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l1Q8R526 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l1Q8R526 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l1Q8R526 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.69■□□□□ 0.58
Pkd1l1Q8R526 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Pkd1l1Q8R526 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd1l1Q8R526 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd1l1Q8R526 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l1Q8R526 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l1Q8R526 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l1Q8R526 Nkain2-201ENSMUST00000092602 558 ntBASIC18.65■□□□□ 0.58
Pkd1l1Q8R526 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l1Q8R526 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd1l1Q8R526 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pkd1l1Q8R526 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.63■□□□□ 0.57
Pkd1l1Q8R526 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pkd1l1Q8R526 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pkd1l1Q8R526 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pkd1l1Q8R526 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pkd1l1Q8R526 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms