Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ubqln1Q8R317 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ubqln1Q8R317 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ubqln1Q8R317 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ubqln1Q8R317 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ubqln1Q8R317 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubqln1Q8R317 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubqln1Q8R317 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubqln1Q8R317 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.92■■□□□ 1.42
Ubqln1Q8R317 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubqln1Q8R317 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ubqln1Q8R317 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubqln1Q8R317 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ubqln1Q8R317 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubqln1Q8R317 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.9■■□□□ 1.42
Ubqln1Q8R317 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ubqln1Q8R317 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ubqln1Q8R317 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ubqln1Q8R317 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ubqln1Q8R317 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Ubqln1Q8R317 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Ubqln1Q8R317 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ubqln1Q8R317 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ubqln1Q8R317 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ubqln1Q8R317 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ubqln1Q8R317 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
Ubqln1Q8R317 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ubqln1Q8R317 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.76■■□□□ 1.39
Ubqln1Q8R317 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Ubqln1Q8R317 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ubqln1Q8R317 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ubqln1Q8R317 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ubqln1Q8R317 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ubqln1Q8R317 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ubqln1Q8R317 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ubqln1Q8R317 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ubqln1Q8R317 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ubqln1Q8R317 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ubqln1Q8R317 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ubqln1Q8R317 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.67■■□□□ 1.38
Ubqln1Q8R317 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ubqln1Q8R317 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ubqln1Q8R317 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.66■■□□□ 1.38
Ubqln1Q8R317 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ubqln1Q8R317 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ubqln1Q8R317 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
Ubqln1Q8R317 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ubqln1Q8R317 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ubqln1Q8R317 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubqln1Q8R317 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubqln1Q8R317 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubqln1Q8R317 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ubqln1Q8R317 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubqln1Q8R317 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubqln1Q8R317 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubqln1Q8R317 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubqln1Q8R317 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Ubqln1Q8R317 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.59■■□□□ 1.37
Ubqln1Q8R317 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubqln1Q8R317 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ubqln1Q8R317 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ubqln1Q8R317 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ubqln1Q8R317 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ubqln1Q8R317 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
Ubqln1Q8R317 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ubqln1Q8R317 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.56■■□□□ 1.36
Ubqln1Q8R317 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ubqln1Q8R317 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ubqln1Q8R317 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubqln1Q8R317 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ubqln1Q8R317 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Ubqln1Q8R317 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ubqln1Q8R317 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Ubqln1Q8R317 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ubqln1Q8R317 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubqln1Q8R317 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Ubqln1Q8R317 Zxda-201ENSMUST00000117281 2621 ntBASIC23.5■■□□□ 1.35
Ubqln1Q8R317 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ubqln1Q8R317 Zfp131-205ENSMUST00000223812 663 ntBASIC23.49■■□□□ 1.35
Ubqln1Q8R317 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ubqln1Q8R317 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ubqln1Q8R317 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ubqln1Q8R317 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.44■■□□□ 1.34
Ubqln1Q8R317 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ubqln1Q8R317 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ubqln1Q8R317 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ubqln1Q8R317 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ubqln1Q8R317 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Ubqln1Q8R317 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Ubqln1Q8R317 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ubqln1Q8R317 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ubqln1Q8R317 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.42■■□□□ 1.34
Ubqln1Q8R317 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ubqln1Q8R317 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Ubqln1Q8R317 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ubqln1Q8R317 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ubqln1Q8R317 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ubqln1Q8R317 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ubqln1Q8R317 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.38■■□□□ 1.33
Ubqln1Q8R317 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms