Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Cgref1Q8R1U2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cgref1Q8R1U2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Cgref1Q8R1U2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cgref1Q8R1U2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cgref1Q8R1U2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cgref1Q8R1U2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cgref1Q8R1U2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Cgref1Q8R1U2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cgref1Q8R1U2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cgref1Q8R1U2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cgref1Q8R1U2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.37■■□□□ 1.65
Cgref1Q8R1U2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Cgref1Q8R1U2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cgref1Q8R1U2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cgref1Q8R1U2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cgref1Q8R1U2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cgref1Q8R1U2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Cgref1Q8R1U2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cgref1Q8R1U2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Cgref1Q8R1U2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cgref1Q8R1U2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Cgref1Q8R1U2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cgref1Q8R1U2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cgref1Q8R1U2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cgref1Q8R1U2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Cgref1Q8R1U2 Gm20634-201ENSMUST00000090779 2956 ntBASIC25.28■■□□□ 1.64
Cgref1Q8R1U2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cgref1Q8R1U2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cgref1Q8R1U2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cgref1Q8R1U2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cgref1Q8R1U2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Cgref1Q8R1U2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.25■■□□□ 1.63
Cgref1Q8R1U2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Cgref1Q8R1U2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Cgref1Q8R1U2 Mipep-204ENSMUST00000225043 1548 ntBASIC25.24■■□□□ 1.63
Cgref1Q8R1U2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Cgref1Q8R1U2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Cgref1Q8R1U2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
Cgref1Q8R1U2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.23■■□□□ 1.63
Cgref1Q8R1U2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cgref1Q8R1U2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Cgref1Q8R1U2 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.2■■□□□ 1.62
Cgref1Q8R1U2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cgref1Q8R1U2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cgref1Q8R1U2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cgref1Q8R1U2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cgref1Q8R1U2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Cgref1Q8R1U2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Cgref1Q8R1U2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Cgref1Q8R1U2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cgref1Q8R1U2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cgref1Q8R1U2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cgref1Q8R1U2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Cgref1Q8R1U2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cgref1Q8R1U2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Cgref1Q8R1U2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Cgref1Q8R1U2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cgref1Q8R1U2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cgref1Q8R1U2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cgref1Q8R1U2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cgref1Q8R1U2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Cgref1Q8R1U2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cgref1Q8R1U2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cgref1Q8R1U2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cgref1Q8R1U2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Cgref1Q8R1U2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cgref1Q8R1U2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cgref1Q8R1U2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cgref1Q8R1U2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Cgref1Q8R1U2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.06■■□□□ 1.6
Cgref1Q8R1U2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Cgref1Q8R1U2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cgref1Q8R1U2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cgref1Q8R1U2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cgref1Q8R1U2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cgref1Q8R1U2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cgref1Q8R1U2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cgref1Q8R1U2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cgref1Q8R1U2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cgref1Q8R1U2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Cgref1Q8R1U2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cgref1Q8R1U2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cgref1Q8R1U2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Cgref1Q8R1U2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Cgref1Q8R1U2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25■■□□□ 1.59
Cgref1Q8R1U2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25■■□□□ 1.59
Cgref1Q8R1U2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cgref1Q8R1U2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Cgref1Q8R1U2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cgref1Q8R1U2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cgref1Q8R1U2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cgref1Q8R1U2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cgref1Q8R1U2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Cgref1Q8R1U2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cgref1Q8R1U2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
Cgref1Q8R1U2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cgref1Q8R1U2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cgref1Q8R1U2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cgref1Q8R1U2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms