Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pdlim5Q8CI51 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.37■■□□□ 1.33
Pdlim5Q8CI51 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pdlim5Q8CI51 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pdlim5Q8CI51 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Pdlim5Q8CI51 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pdlim5Q8CI51 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pdlim5Q8CI51 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pdlim5Q8CI51 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.33■■□□□ 1.32
Pdlim5Q8CI51 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Pdlim5Q8CI51 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pdlim5Q8CI51 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pdlim5Q8CI51 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.32■■□□□ 1.32
Pdlim5Q8CI51 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdlim5Q8CI51 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Pdlim5Q8CI51 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Pdlim5Q8CI51 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim5Q8CI51 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
Pdlim5Q8CI51 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pdlim5Q8CI51 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pdlim5Q8CI51 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pdlim5Q8CI51 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pdlim5Q8CI51 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pdlim5Q8CI51 Peli2-204ENSMUST00000226513 1320 ntBASIC23.26■■□□□ 1.31
Pdlim5Q8CI51 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.25■■□□□ 1.31
Pdlim5Q8CI51 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pdlim5Q8CI51 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.24■■□□□ 1.31
Pdlim5Q8CI51 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pdlim5Q8CI51 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Pdlim5Q8CI51 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pdlim5Q8CI51 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim5Q8CI51 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim5Q8CI51 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Pdlim5Q8CI51 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pdlim5Q8CI51 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pdlim5Q8CI51 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pdlim5Q8CI51 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pdlim5Q8CI51 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pdlim5Q8CI51 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Pdlim5Q8CI51 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pdlim5Q8CI51 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pdlim5Q8CI51 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Pdlim5Q8CI51 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.16■■□□□ 1.3
Pdlim5Q8CI51 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pdlim5Q8CI51 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pdlim5Q8CI51 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pdlim5Q8CI51 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pdlim5Q8CI51 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Pdlim5Q8CI51 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.12■■□□□ 1.29
Pdlim5Q8CI51 Amer2-203ENSMUST00000225247 2662 ntBASIC23.12■■□□□ 1.29
Pdlim5Q8CI51 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pdlim5Q8CI51 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pdlim5Q8CI51 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Pdlim5Q8CI51 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.09■■□□□ 1.29
Pdlim5Q8CI51 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Pdlim5Q8CI51 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pdlim5Q8CI51 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pdlim5Q8CI51 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pdlim5Q8CI51 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pdlim5Q8CI51 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Pdlim5Q8CI51 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pdlim5Q8CI51 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.04■■□□□ 1.28
Pdlim5Q8CI51 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pdlim5Q8CI51 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
Pdlim5Q8CI51 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pdlim5Q8CI51 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pdlim5Q8CI51 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pdlim5Q8CI51 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pdlim5Q8CI51 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pdlim5Q8CI51 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pdlim5Q8CI51 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pdlim5Q8CI51 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Pdlim5Q8CI51 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pdlim5Q8CI51 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pdlim5Q8CI51 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Pdlim5Q8CI51 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pdlim5Q8CI51 Gm24804-201ENSMUST00000174982 85 ntBASIC22.99■■□□□ 1.27
Pdlim5Q8CI51 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Pdlim5Q8CI51 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Pdlim5Q8CI51 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pdlim5Q8CI51 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pdlim5Q8CI51 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pdlim5Q8CI51 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pdlim5Q8CI51 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Pdlim5Q8CI51 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pdlim5Q8CI51 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pdlim5Q8CI51 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pdlim5Q8CI51 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pdlim5Q8CI51 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Pdlim5Q8CI51 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.93■■□□□ 1.26
Pdlim5Q8CI51 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pdlim5Q8CI51 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.92■■□□□ 1.26
Pdlim5Q8CI51 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Pdlim5Q8CI51 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Pdlim5Q8CI51 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pdlim5Q8CI51 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pdlim5Q8CI51 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pdlim5Q8CI51 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pdlim5Q8CI51 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pdlim5Q8CI51 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms