Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.13■■□□□ 1.61
Pcdhb7Q8CDY9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb7Q8CDY9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb7Q8CDY9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb7Q8CDY9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Pcdhb7Q8CDY9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb7Q8CDY9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb7Q8CDY9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb7Q8CDY9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Pcdhb7Q8CDY9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb7Q8CDY9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb7Q8CDY9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
Pcdhb7Q8CDY9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhb7Q8CDY9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb7Q8CDY9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Pcdhb7Q8CDY9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb7Q8CDY9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb7Q8CDY9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.04■■□□□ 1.6
Pcdhb7Q8CDY9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb7Q8CDY9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Pcdhb7Q8CDY9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb7Q8CDY9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb7Q8CDY9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb7Q8CDY9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhb7Q8CDY9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhb7Q8CDY9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhb7Q8CDY9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb7Q8CDY9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb7Q8CDY9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhb7Q8CDY9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Pcdhb7Q8CDY9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb7Q8CDY9 Gm16148-201ENSMUST00000119653 893 ntBASIC24.97■■□□□ 1.59
Pcdhb7Q8CDY9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb7Q8CDY9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdhb7Q8CDY9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb7Q8CDY9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb7Q8CDY9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb7Q8CDY9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.95■■□□□ 1.59
Pcdhb7Q8CDY9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb7Q8CDY9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb7Q8CDY9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb7Q8CDY9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb7Q8CDY9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb7Q8CDY9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.93■■□□□ 1.58
Pcdhb7Q8CDY9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb7Q8CDY9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.93■■□□□ 1.58
Pcdhb7Q8CDY9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb7Q8CDY9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb7Q8CDY9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb7Q8CDY9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb7Q8CDY9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.91■■□□□ 1.58
Pcdhb7Q8CDY9 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.9■■□□□ 1.58
Pcdhb7Q8CDY9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb7Q8CDY9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhb7Q8CDY9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
Pcdhb7Q8CDY9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb7Q8CDY9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Pcdhb7Q8CDY9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb7Q8CDY9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhb7Q8CDY9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Pcdhb7Q8CDY9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb7Q8CDY9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb7Q8CDY9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb7Q8CDY9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhb7Q8CDY9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhb7Q8CDY9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Pcdhb7Q8CDY9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Pcdhb7Q8CDY9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb7Q8CDY9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb7Q8CDY9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb7Q8CDY9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Pcdhb7Q8CDY9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb7Q8CDY9 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.77■■□□□ 1.56
Pcdhb7Q8CDY9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb7Q8CDY9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb7Q8CDY9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb7Q8CDY9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb7Q8CDY9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Pcdhb7Q8CDY9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb7Q8CDY9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb7Q8CDY9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb7Q8CDY9 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.72■■□□□ 1.55
Pcdhb7Q8CDY9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb7Q8CDY9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb7Q8CDY9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.7■■□□□ 1.54
Pcdhb7Q8CDY9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Pcdhb7Q8CDY9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Pcdhb7Q8CDY9 Amer2-203ENSMUST00000225247 2662 ntBASIC24.68■■□□□ 1.54
Pcdhb7Q8CDY9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb7Q8CDY9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb7Q8CDY9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb7Q8CDY9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb7Q8CDY9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb7Q8CDY9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb7Q8CDY9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Pcdhb7Q8CDY9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb7Q8CDY9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb7Q8CDY9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb7Q8CDY9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
Pcdhb7Q8CDY9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms