Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SynpoQ8CC35 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SynpoQ8CC35 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SynpoQ8CC35 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SynpoQ8CC35 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SynpoQ8CC35 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
SynpoQ8CC35 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SynpoQ8CC35 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SynpoQ8CC35 Gm45855-201ENSMUST00000212546 880 ntBASIC24.12■■□□□ 1.45
SynpoQ8CC35 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.11■■□□□ 1.45
SynpoQ8CC35 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SynpoQ8CC35 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.1■■□□□ 1.45
SynpoQ8CC35 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
SynpoQ8CC35 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SynpoQ8CC35 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SynpoQ8CC35 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SynpoQ8CC35 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.08■■□□□ 1.45
SynpoQ8CC35 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SynpoQ8CC35 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SynpoQ8CC35 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SynpoQ8CC35 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SynpoQ8CC35 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SynpoQ8CC35 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SynpoQ8CC35 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.03■■□□□ 1.44
SynpoQ8CC35 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SynpoQ8CC35 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
SynpoQ8CC35 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SynpoQ8CC35 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SynpoQ8CC35 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SynpoQ8CC35 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SynpoQ8CC35 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
SynpoQ8CC35 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
SynpoQ8CC35 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
SynpoQ8CC35 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SynpoQ8CC35 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SynpoQ8CC35 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.98■■□□□ 1.43
SynpoQ8CC35 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SynpoQ8CC35 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SynpoQ8CC35 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SynpoQ8CC35 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SynpoQ8CC35 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.96■■□□□ 1.43
SynpoQ8CC35 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
SynpoQ8CC35 Gm9397-201ENSMUST00000200125 605 ntBASIC23.95■■□□□ 1.42
SynpoQ8CC35 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SynpoQ8CC35 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
SynpoQ8CC35 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SynpoQ8CC35 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SynpoQ8CC35 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SynpoQ8CC35 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SynpoQ8CC35 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.91■■□□□ 1.42
SynpoQ8CC35 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.91■■□□□ 1.42
SynpoQ8CC35 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.89■■□□□ 1.41
SynpoQ8CC35 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SynpoQ8CC35 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
SynpoQ8CC35 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SynpoQ8CC35 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SynpoQ8CC35 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SynpoQ8CC35 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SynpoQ8CC35 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SynpoQ8CC35 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.87■■□□□ 1.41
SynpoQ8CC35 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SynpoQ8CC35 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.86■■□□□ 1.41
SynpoQ8CC35 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.86■■□□□ 1.41
SynpoQ8CC35 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SynpoQ8CC35 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.84■■□□□ 1.41
SynpoQ8CC35 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SynpoQ8CC35 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SynpoQ8CC35 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SynpoQ8CC35 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SynpoQ8CC35 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SynpoQ8CC35 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SynpoQ8CC35 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SynpoQ8CC35 Zxda-201ENSMUST00000117281 2621 ntBASIC23.81■■□□□ 1.4
SynpoQ8CC35 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SynpoQ8CC35 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.8■■□□□ 1.4
SynpoQ8CC35 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
SynpoQ8CC35 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SynpoQ8CC35 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SynpoQ8CC35 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SynpoQ8CC35 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SynpoQ8CC35 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SynpoQ8CC35 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
SynpoQ8CC35 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SynpoQ8CC35 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.77■■□□□ 1.4
SynpoQ8CC35 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SynpoQ8CC35 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SynpoQ8CC35 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SynpoQ8CC35 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.76■■□□□ 1.39
SynpoQ8CC35 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.75■■□□□ 1.39
SynpoQ8CC35 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.75■■□□□ 1.39
SynpoQ8CC35 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SynpoQ8CC35 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SynpoQ8CC35 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SynpoQ8CC35 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SynpoQ8CC35 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SynpoQ8CC35 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
SynpoQ8CC35 Gm24970-201ENSMUST00000175582 82 ntBASIC23.71■■□□□ 1.39
SynpoQ8CC35 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SynpoQ8CC35 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SynpoQ8CC35 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms