Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim9Q8C7M3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Trim9Q8C7M3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim9Q8C7M3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Trim9Q8C7M3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trim9Q8C7M3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Trim9Q8C7M3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Trim9Q8C7M3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Trim9Q8C7M3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trim9Q8C7M3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Trim9Q8C7M3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Trim9Q8C7M3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
Trim9Q8C7M3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Trim9Q8C7M3 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.19■■■□□ 2.1
Trim9Q8C7M3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim9Q8C7M3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.18■■■□□ 2.1
Trim9Q8C7M3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Trim9Q8C7M3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Trim9Q8C7M3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.17■■■□□ 2.1
Trim9Q8C7M3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim9Q8C7M3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Trim9Q8C7M3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Trim9Q8C7M3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Trim9Q8C7M3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Trim9Q8C7M3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Trim9Q8C7M3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Trim9Q8C7M3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Trim9Q8C7M3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Trim9Q8C7M3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Trim9Q8C7M3 Zxda-201ENSMUST00000117281 2621 ntBASIC28.12■■■□□ 2.09
Trim9Q8C7M3 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.11■■■□□ 2.09
Trim9Q8C7M3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.11■■■□□ 2.09
Trim9Q8C7M3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Trim9Q8C7M3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim9Q8C7M3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim9Q8C7M3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Trim9Q8C7M3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Trim9Q8C7M3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Trim9Q8C7M3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Trim9Q8C7M3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Trim9Q8C7M3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.04■■■□□ 2.08
Trim9Q8C7M3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Trim9Q8C7M3 Gm16148-201ENSMUST00000119653 893 ntBASIC28.03■■■□□ 2.08
Trim9Q8C7M3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Trim9Q8C7M3 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.01■■■□□ 2.08
Trim9Q8C7M3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Trim9Q8C7M3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28■■■□□ 2.07
Trim9Q8C7M3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trim9Q8C7M3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Trim9Q8C7M3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Trim9Q8C7M3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Trim9Q8C7M3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Trim9Q8C7M3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Trim9Q8C7M3 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.97■■■□□ 2.07
Trim9Q8C7M3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trim9Q8C7M3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trim9Q8C7M3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trim9Q8C7M3 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.94■■■□□ 2.06
Trim9Q8C7M3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trim9Q8C7M3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Trim9Q8C7M3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Trim9Q8C7M3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
Trim9Q8C7M3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Trim9Q8C7M3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Trim9Q8C7M3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Trim9Q8C7M3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Trim9Q8C7M3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Trim9Q8C7M3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Trim9Q8C7M3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.83■■■□□ 2.05
Trim9Q8C7M3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.82■■■□□ 2.04
Trim9Q8C7M3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Trim9Q8C7M3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.81■■■□□ 2.04
Trim9Q8C7M3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Trim9Q8C7M3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trim9Q8C7M3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Trim9Q8C7M3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trim9Q8C7M3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Trim9Q8C7M3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim9Q8C7M3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trim9Q8C7M3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim9Q8C7M3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
Trim9Q8C7M3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Trim9Q8C7M3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim9Q8C7M3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Trim9Q8C7M3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.74■■■□□ 2.03
Trim9Q8C7M3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trim9Q8C7M3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Trim9Q8C7M3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
Trim9Q8C7M3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Trim9Q8C7M3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Trim9Q8C7M3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Trim9Q8C7M3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trim9Q8C7M3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trim9Q8C7M3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Trim9Q8C7M3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Trim9Q8C7M3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Trim9Q8C7M3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Trim9Q8C7M3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Trim9Q8C7M3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.65■■■□□ 2.02
Trim9Q8C7M3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms