Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Sh3rf3Q8C120 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Sh3rf3Q8C120 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Sh3rf3Q8C120 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sh3rf3Q8C120 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Sh3rf3Q8C120 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sh3rf3Q8C120 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Sh3rf3Q8C120 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3rf3Q8C120 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3rf3Q8C120 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.42■■□□□ 1.82
Sh3rf3Q8C120 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Sh3rf3Q8C120 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Sh3rf3Q8C120 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sh3rf3Q8C120 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sh3rf3Q8C120 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Sh3rf3Q8C120 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Sh3rf3Q8C120 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sh3rf3Q8C120 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sh3rf3Q8C120 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sh3rf3Q8C120 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Sh3rf3Q8C120 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Sh3rf3Q8C120 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sh3rf3Q8C120 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Sh3rf3Q8C120 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.3■■□□□ 1.8
Sh3rf3Q8C120 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sh3rf3Q8C120 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sh3rf3Q8C120 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.27■■□□□ 1.8
Sh3rf3Q8C120 Gm16148-201ENSMUST00000119653 893 ntBASIC26.26■■□□□ 1.79
Sh3rf3Q8C120 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sh3rf3Q8C120 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Sh3rf3Q8C120 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sh3rf3Q8C120 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.22■■□□□ 1.79
Sh3rf3Q8C120 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Sh3rf3Q8C120 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sh3rf3Q8C120 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Sh3rf3Q8C120 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Sh3rf3Q8C120 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Sh3rf3Q8C120 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Sh3rf3Q8C120 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sh3rf3Q8C120 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Sh3rf3Q8C120 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Sh3rf3Q8C120 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Sh3rf3Q8C120 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Sh3rf3Q8C120 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sh3rf3Q8C120 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.13■■□□□ 1.77
Sh3rf3Q8C120 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Sh3rf3Q8C120 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Sh3rf3Q8C120 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Sh3rf3Q8C120 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Sh3rf3Q8C120 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.11■■□□□ 1.77
Sh3rf3Q8C120 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Sh3rf3Q8C120 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sh3rf3Q8C120 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf3Q8C120 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf3Q8C120 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf3Q8C120 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3rf3Q8C120 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sh3rf3Q8C120 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sh3rf3Q8C120 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Sh3rf3Q8C120 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
Sh3rf3Q8C120 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Sh3rf3Q8C120 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Sh3rf3Q8C120 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.02■■□□□ 1.76
Sh3rf3Q8C120 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Sh3rf3Q8C120 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Sh3rf3Q8C120 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sh3rf3Q8C120 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sh3rf3Q8C120 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sh3rf3Q8C120 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sh3rf3Q8C120 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
Sh3rf3Q8C120 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh3rf3Q8C120 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh3rf3Q8C120 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Sh3rf3Q8C120 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.96■■□□□ 1.75
Sh3rf3Q8C120 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Sh3rf3Q8C120 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sh3rf3Q8C120 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Sh3rf3Q8C120 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Sh3rf3Q8C120 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.92■■□□□ 1.74
Sh3rf3Q8C120 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sh3rf3Q8C120 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Sh3rf3Q8C120 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sh3rf3Q8C120 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sh3rf3Q8C120 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sh3rf3Q8C120 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Sh3rf3Q8C120 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.89■■□□□ 1.74
Sh3rf3Q8C120 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms