Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbfox3Q8BIF2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rbfox3Q8BIF2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.16■□□□□ 0.66
Rbfox3Q8BIF2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rbfox3Q8BIF2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rbfox3Q8BIF2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rbfox3Q8BIF2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.15■□□□□ 0.66
Rbfox3Q8BIF2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rbfox3Q8BIF2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rbfox3Q8BIF2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rbfox3Q8BIF2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Rbfox3Q8BIF2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rbfox3Q8BIF2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.13■□□□□ 0.65
Rbfox3Q8BIF2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbfox3Q8BIF2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbfox3Q8BIF2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rbfox3Q8BIF2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox3Q8BIF2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rbfox3Q8BIF2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.11■□□□□ 0.65
Rbfox3Q8BIF2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rbfox3Q8BIF2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rbfox3Q8BIF2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rbfox3Q8BIF2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
Rbfox3Q8BIF2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rbfox3Q8BIF2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.09■□□□□ 0.65
Rbfox3Q8BIF2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.09■□□□□ 0.65
Rbfox3Q8BIF2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.08■□□□□ 0.64
Rbfox3Q8BIF2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rbfox3Q8BIF2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rbfox3Q8BIF2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbfox3Q8BIF2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rbfox3Q8BIF2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbfox3Q8BIF2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbfox3Q8BIF2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rbfox3Q8BIF2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rbfox3Q8BIF2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbfox3Q8BIF2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbfox3Q8BIF2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rbfox3Q8BIF2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rbfox3Q8BIF2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rbfox3Q8BIF2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rbfox3Q8BIF2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rbfox3Q8BIF2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rbfox3Q8BIF2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rbfox3Q8BIF2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Rbfox3Q8BIF2 Gm6206-201ENSMUST00000133472 2199 ntBASIC19■□□□□ 0.63
Rbfox3Q8BIF2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rbfox3Q8BIF2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rbfox3Q8BIF2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox3Q8BIF2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox3Q8BIF2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbfox3Q8BIF2 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.96■□□□□ 0.63
Rbfox3Q8BIF2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rbfox3Q8BIF2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rbfox3Q8BIF2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rbfox3Q8BIF2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rbfox3Q8BIF2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rbfox3Q8BIF2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rbfox3Q8BIF2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Rbfox3Q8BIF2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rbfox3Q8BIF2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rbfox3Q8BIF2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rbfox3Q8BIF2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rbfox3Q8BIF2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rbfox3Q8BIF2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rbfox3Q8BIF2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rbfox3Q8BIF2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rbfox3Q8BIF2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rbfox3Q8BIF2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rbfox3Q8BIF2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rbfox3Q8BIF2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rbfox3Q8BIF2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.87■□□□□ 0.61
Rbfox3Q8BIF2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rbfox3Q8BIF2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.86■□□□□ 0.61
Rbfox3Q8BIF2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rbfox3Q8BIF2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rbfox3Q8BIF2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rbfox3Q8BIF2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rbfox3Q8BIF2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rbfox3Q8BIF2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rbfox3Q8BIF2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rbfox3Q8BIF2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rbfox3Q8BIF2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rbfox3Q8BIF2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rbfox3Q8BIF2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Rbfox3Q8BIF2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rbfox3Q8BIF2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rbfox3Q8BIF2 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.82■□□□□ 0.6
Rbfox3Q8BIF2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rbfox3Q8BIF2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rbfox3Q8BIF2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rbfox3Q8BIF2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Rbfox3Q8BIF2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rbfox3Q8BIF2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rbfox3Q8BIF2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbfox3Q8BIF2 Zfp131-205ENSMUST00000223812 663 ntBASIC18.81■□□□□ 0.6
Rbfox3Q8BIF2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rbfox3Q8BIF2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rbfox3Q8BIF2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rbfox3Q8BIF2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms