Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Depdc1bQ8BH88 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Depdc1bQ8BH88 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Depdc1bQ8BH88 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Depdc1bQ8BH88 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Depdc1bQ8BH88 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Depdc1bQ8BH88 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Depdc1bQ8BH88 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Depdc1bQ8BH88 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
Depdc1bQ8BH88 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.33■■□□□ 1.97
Depdc1bQ8BH88 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Depdc1bQ8BH88 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Depdc1bQ8BH88 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Depdc1bQ8BH88 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.3■■□□□ 1.96
Depdc1bQ8BH88 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.3■■□□□ 1.96
Depdc1bQ8BH88 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Depdc1bQ8BH88 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Depdc1bQ8BH88 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Depdc1bQ8BH88 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Depdc1bQ8BH88 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Depdc1bQ8BH88 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Depdc1bQ8BH88 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
Depdc1bQ8BH88 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
Depdc1bQ8BH88 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Depdc1bQ8BH88 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
Depdc1bQ8BH88 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Depdc1bQ8BH88 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.25■■□□□ 1.95
Depdc1bQ8BH88 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Depdc1bQ8BH88 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Depdc1bQ8BH88 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.22■■□□□ 1.95
Depdc1bQ8BH88 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Depdc1bQ8BH88 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.21■■□□□ 1.95
Depdc1bQ8BH88 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Depdc1bQ8BH88 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.21■■□□□ 1.95
Depdc1bQ8BH88 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Depdc1bQ8BH88 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.19■■□□□ 1.94
Depdc1bQ8BH88 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Depdc1bQ8BH88 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.15■■□□□ 1.94
Depdc1bQ8BH88 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Depdc1bQ8BH88 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Depdc1bQ8BH88 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.13■■□□□ 1.93
Depdc1bQ8BH88 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
Depdc1bQ8BH88 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Depdc1bQ8BH88 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Depdc1bQ8BH88 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Depdc1bQ8BH88 Zxda-201ENSMUST00000117281 2621 ntBASIC27.11■■□□□ 1.93
Depdc1bQ8BH88 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Depdc1bQ8BH88 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Depdc1bQ8BH88 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Depdc1bQ8BH88 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Depdc1bQ8BH88 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Depdc1bQ8BH88 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Depdc1bQ8BH88 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Depdc1bQ8BH88 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Depdc1bQ8BH88 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Depdc1bQ8BH88 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Depdc1bQ8BH88 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.03■■□□□ 1.92
Depdc1bQ8BH88 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Depdc1bQ8BH88 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Depdc1bQ8BH88 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.01■■□□□ 1.92
Depdc1bQ8BH88 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
Depdc1bQ8BH88 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.01■■□□□ 1.91
Depdc1bQ8BH88 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27■■□□□ 1.91
Depdc1bQ8BH88 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Depdc1bQ8BH88 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27■■□□□ 1.91
Depdc1bQ8BH88 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Depdc1bQ8BH88 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Depdc1bQ8BH88 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Depdc1bQ8BH88 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Depdc1bQ8BH88 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Depdc1bQ8BH88 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.98■■□□□ 1.91
Depdc1bQ8BH88 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
Depdc1bQ8BH88 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.96■■□□□ 1.91
Depdc1bQ8BH88 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.96■■□□□ 1.91
Depdc1bQ8BH88 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.96■■□□□ 1.91
Depdc1bQ8BH88 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Depdc1bQ8BH88 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
Depdc1bQ8BH88 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Depdc1bQ8BH88 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Depdc1bQ8BH88 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.93■■□□□ 1.9
Depdc1bQ8BH88 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Depdc1bQ8BH88 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Depdc1bQ8BH88 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Depdc1bQ8BH88 Gm45855-201ENSMUST00000212546 880 ntBASIC26.92■■□□□ 1.9
Depdc1bQ8BH88 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Depdc1bQ8BH88 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Depdc1bQ8BH88 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Depdc1bQ8BH88 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Depdc1bQ8BH88 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Depdc1bQ8BH88 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Depdc1bQ8BH88 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.88■■□□□ 1.89
Depdc1bQ8BH88 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.88■■□□□ 1.89
Depdc1bQ8BH88 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Depdc1bQ8BH88 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Depdc1bQ8BH88 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Depdc1bQ8BH88 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Depdc1bQ8BH88 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Depdc1bQ8BH88 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Depdc1bQ8BH88 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Depdc1bQ8BH88 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms