Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.47■■■□□ 2.31
Samm50Q8BGH2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Samm50Q8BGH2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
Samm50Q8BGH2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.46■■■□□ 2.31
Samm50Q8BGH2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Samm50Q8BGH2 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.43■■■□□ 2.3
Samm50Q8BGH2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.43■■■□□ 2.3
Samm50Q8BGH2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Samm50Q8BGH2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Samm50Q8BGH2 Gm16148-201ENSMUST00000119653 893 ntBASIC29.42■■■□□ 2.3
Samm50Q8BGH2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Samm50Q8BGH2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Samm50Q8BGH2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
Samm50Q8BGH2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Samm50Q8BGH2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Samm50Q8BGH2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
Samm50Q8BGH2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.37■■■□□ 2.29
Samm50Q8BGH2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Samm50Q8BGH2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.35■■■□□ 2.29
Samm50Q8BGH2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Samm50Q8BGH2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Samm50Q8BGH2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
Samm50Q8BGH2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Samm50Q8BGH2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Samm50Q8BGH2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
Samm50Q8BGH2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Samm50Q8BGH2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Samm50Q8BGH2 Zfp131-205ENSMUST00000223812 663 ntBASIC29.27■■■□□ 2.28
Samm50Q8BGH2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
Samm50Q8BGH2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Samm50Q8BGH2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Samm50Q8BGH2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Samm50Q8BGH2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Samm50Q8BGH2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Samm50Q8BGH2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Samm50Q8BGH2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
Samm50Q8BGH2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Samm50Q8BGH2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Samm50Q8BGH2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Samm50Q8BGH2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Samm50Q8BGH2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Samm50Q8BGH2 Amer2-203ENSMUST00000225247 2662 ntBASIC29.19■■■□□ 2.26
Samm50Q8BGH2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Samm50Q8BGH2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Samm50Q8BGH2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Samm50Q8BGH2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Samm50Q8BGH2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Samm50Q8BGH2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Samm50Q8BGH2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.12■■■□□ 2.25
Samm50Q8BGH2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Samm50Q8BGH2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Samm50Q8BGH2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.1■■■□□ 2.25
Samm50Q8BGH2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Samm50Q8BGH2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Samm50Q8BGH2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
Samm50Q8BGH2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.08■■■□□ 2.25
Samm50Q8BGH2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Samm50Q8BGH2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.07■■■□□ 2.24
Samm50Q8BGH2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Samm50Q8BGH2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Samm50Q8BGH2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Samm50Q8BGH2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Samm50Q8BGH2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Samm50Q8BGH2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Samm50Q8BGH2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Samm50Q8BGH2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Samm50Q8BGH2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.98■■■□□ 2.23
Samm50Q8BGH2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Samm50Q8BGH2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Samm50Q8BGH2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
Samm50Q8BGH2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.23
Samm50Q8BGH2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Samm50Q8BGH2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
Samm50Q8BGH2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Samm50Q8BGH2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Samm50Q8BGH2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Samm50Q8BGH2 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.93■■■□□ 2.22
Samm50Q8BGH2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Samm50Q8BGH2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Samm50Q8BGH2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Samm50Q8BGH2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Samm50Q8BGH2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Samm50Q8BGH2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Samm50Q8BGH2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
Samm50Q8BGH2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.89■■■□□ 2.22
Samm50Q8BGH2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Samm50Q8BGH2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.88■■■□□ 2.21
Samm50Q8BGH2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
Samm50Q8BGH2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Samm50Q8BGH2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.87■■■□□ 2.21
Samm50Q8BGH2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Samm50Q8BGH2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.86■■■□□ 2.21
Samm50Q8BGH2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
Samm50Q8BGH2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.85■■■□□ 2.21
Samm50Q8BGH2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
Samm50Q8BGH2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.2
Samm50Q8BGH2 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.82■■■□□ 2.2
Samm50Q8BGH2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.81■■■□□ 2.2
Samm50Q8BGH2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Samm50Q8BGH2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms