Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.26■□□□□ 0.99
Upk3bQ80YF6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.26■□□□□ 0.99
Upk3bQ80YF6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Upk3bQ80YF6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Upk3bQ80YF6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Upk3bQ80YF6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Upk3bQ80YF6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bQ80YF6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Upk3bQ80YF6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bQ80YF6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bQ80YF6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bQ80YF6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bQ80YF6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bQ80YF6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bQ80YF6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bQ80YF6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bQ80YF6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bQ80YF6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bQ80YF6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Upk3bQ80YF6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Upk3bQ80YF6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Upk3bQ80YF6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upk3bQ80YF6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Upk3bQ80YF6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Upk3bQ80YF6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.15■□□□□ 0.98
Upk3bQ80YF6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upk3bQ80YF6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.15■□□□□ 0.98
Upk3bQ80YF6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upk3bQ80YF6 Gm27322-201ENSMUST00000184007 104 ntBASIC21.15■□□□□ 0.98
Upk3bQ80YF6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Upk3bQ80YF6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Upk3bQ80YF6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Upk3bQ80YF6 Amer2-203ENSMUST00000225247 2662 ntBASIC21.13■□□□□ 0.97
Upk3bQ80YF6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Upk3bQ80YF6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.13■□□□□ 0.97
Upk3bQ80YF6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Upk3bQ80YF6 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.13■□□□□ 0.97
Upk3bQ80YF6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Upk3bQ80YF6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Upk3bQ80YF6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Upk3bQ80YF6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Upk3bQ80YF6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Upk3bQ80YF6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upk3bQ80YF6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upk3bQ80YF6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.09■□□□□ 0.97
Upk3bQ80YF6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Upk3bQ80YF6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Upk3bQ80YF6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Upk3bQ80YF6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upk3bQ80YF6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Upk3bQ80YF6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upk3bQ80YF6 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.05■□□□□ 0.96
Upk3bQ80YF6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upk3bQ80YF6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upk3bQ80YF6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.04■□□□□ 0.96
Upk3bQ80YF6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk3bQ80YF6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk3bQ80YF6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk3bQ80YF6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk3bQ80YF6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk3bQ80YF6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk3bQ80YF6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Upk3bQ80YF6 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.02■□□□□ 0.95
Upk3bQ80YF6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Upk3bQ80YF6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Upk3bQ80YF6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.99■□□□□ 0.95
Upk3bQ80YF6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upk3bQ80YF6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upk3bQ80YF6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk3bQ80YF6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk3bQ80YF6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.98■□□□□ 0.95
Upk3bQ80YF6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk3bQ80YF6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.97■□□□□ 0.95
Upk3bQ80YF6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk3bQ80YF6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk3bQ80YF6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk3bQ80YF6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.96■□□□□ 0.95
Upk3bQ80YF6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Upk3bQ80YF6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.95■□□□□ 0.94
Upk3bQ80YF6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Upk3bQ80YF6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3bQ80YF6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk3bQ80YF6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk3bQ80YF6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Upk3bQ80YF6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk3bQ80YF6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk3bQ80YF6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Upk3bQ80YF6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Upk3bQ80YF6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Upk3bQ80YF6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Upk3bQ80YF6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Upk3bQ80YF6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Upk3bQ80YF6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Upk3bQ80YF6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Upk3bQ80YF6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.86■□□□□ 0.93
Upk3bQ80YF6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Upk3bQ80YF6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk3bQ80YF6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Upk3bQ80YF6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk3bQ80YF6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms