Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
Kdm3aQ6PCM1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Kdm3aQ6PCM1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Kdm3aQ6PCM1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Kdm3aQ6PCM1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Kdm3aQ6PCM1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Kdm3aQ6PCM1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Kdm3aQ6PCM1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Kdm3aQ6PCM1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Kdm3aQ6PCM1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Kdm3aQ6PCM1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Kdm3aQ6PCM1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Kdm3aQ6PCM1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Kdm3aQ6PCM1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Kdm3aQ6PCM1 Gm9397-201ENSMUST00000200125 605 ntBASIC31.14■■■□□ 2.58
Kdm3aQ6PCM1 Gm45855-201ENSMUST00000212546 880 ntBASIC31.11■■■□□ 2.57
Kdm3aQ6PCM1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Kdm3aQ6PCM1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.11■■■□□ 2.57
Kdm3aQ6PCM1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.1■■■□□ 2.57
Kdm3aQ6PCM1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Kdm3aQ6PCM1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
Kdm3aQ6PCM1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Kdm3aQ6PCM1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Kdm3aQ6PCM1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.06■■■□□ 2.56
Kdm3aQ6PCM1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
Kdm3aQ6PCM1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Kdm3aQ6PCM1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Kdm3aQ6PCM1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.04■■■□□ 2.56
Kdm3aQ6PCM1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Kdm3aQ6PCM1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.03■■■□□ 2.56
Kdm3aQ6PCM1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Kdm3aQ6PCM1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Kdm3aQ6PCM1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Kdm3aQ6PCM1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Kdm3aQ6PCM1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Kdm3aQ6PCM1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Kdm3aQ6PCM1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.98■■■□□ 2.55
Kdm3aQ6PCM1 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.98■■■□□ 2.55
Kdm3aQ6PCM1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Kdm3aQ6PCM1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.97■■■□□ 2.55
Kdm3aQ6PCM1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Kdm3aQ6PCM1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.92■■■□□ 2.54
Kdm3aQ6PCM1 Gm24970-201ENSMUST00000175582 82 ntBASIC30.91■■■□□ 2.54
Kdm3aQ6PCM1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.91■■■□□ 2.54
Kdm3aQ6PCM1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Kdm3aQ6PCM1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
Kdm3aQ6PCM1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Kdm3aQ6PCM1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Kdm3aQ6PCM1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Kdm3aQ6PCM1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Kdm3aQ6PCM1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.85■■■□□ 2.53
Kdm3aQ6PCM1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.84■■■□□ 2.53
Kdm3aQ6PCM1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.84■■■□□ 2.53
Kdm3aQ6PCM1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Kdm3aQ6PCM1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Kdm3aQ6PCM1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Kdm3aQ6PCM1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Kdm3aQ6PCM1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Kdm3aQ6PCM1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.8■■■□□ 2.52
Kdm3aQ6PCM1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
Kdm3aQ6PCM1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Kdm3aQ6PCM1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
Kdm3aQ6PCM1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Kdm3aQ6PCM1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Kdm3aQ6PCM1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Kdm3aQ6PCM1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
Kdm3aQ6PCM1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Kdm3aQ6PCM1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.73■■■□□ 2.51
Kdm3aQ6PCM1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Kdm3aQ6PCM1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Kdm3aQ6PCM1 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.72■■■□□ 2.51
Kdm3aQ6PCM1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Kdm3aQ6PCM1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Kdm3aQ6PCM1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.71■■■□□ 2.51
Kdm3aQ6PCM1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Kdm3aQ6PCM1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
Kdm3aQ6PCM1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Kdm3aQ6PCM1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Kdm3aQ6PCM1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Kdm3aQ6PCM1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Kdm3aQ6PCM1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.68■■■□□ 2.5
Kdm3aQ6PCM1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Kdm3aQ6PCM1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Kdm3aQ6PCM1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Kdm3aQ6PCM1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Kdm3aQ6PCM1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm3aQ6PCM1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.66■■■□□ 2.5
Kdm3aQ6PCM1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm3aQ6PCM1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.65■■■□□ 2.5
Kdm3aQ6PCM1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Kdm3aQ6PCM1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
Kdm3aQ6PCM1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Kdm3aQ6PCM1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Kdm3aQ6PCM1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Kdm3aQ6PCM1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Kdm3aQ6PCM1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Kdm3aQ6PCM1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Kdm3aQ6PCM1 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.58■■■□□ 2.49
Kdm3aQ6PCM1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Kdm3aQ6PCM1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms