Protein–RNA interactions for Protein: Q64705

Usf2, Upstream stimulatory factor 2, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf2Q64705 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usf2Q64705 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usf2Q64705 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usf2Q64705 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usf2Q64705 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usf2Q64705 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usf2Q64705 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.97■□□□□ 0.95
Usf2Q64705 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usf2Q64705 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usf2Q64705 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usf2Q64705 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usf2Q64705 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Usf2Q64705 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usf2Q64705 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usf2Q64705 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usf2Q64705 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usf2Q64705 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usf2Q64705 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.91■□□□□ 0.94
Usf2Q64705 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usf2Q64705 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usf2Q64705 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usf2Q64705 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usf2Q64705 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usf2Q64705 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usf2Q64705 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usf2Q64705 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Usf2Q64705 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usf2Q64705 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usf2Q64705 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usf2Q64705 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usf2Q64705 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usf2Q64705 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usf2Q64705 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.83■□□□□ 0.93
Usf2Q64705 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usf2Q64705 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usf2Q64705 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usf2Q64705 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usf2Q64705 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usf2Q64705 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usf2Q64705 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usf2Q64705 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usf2Q64705 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.79■□□□□ 0.92
Usf2Q64705 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usf2Q64705 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Usf2Q64705 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Usf2Q64705 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usf2Q64705 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.78■□□□□ 0.92
Usf2Q64705 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usf2Q64705 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usf2Q64705 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usf2Q64705 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usf2Q64705 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Usf2Q64705 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Usf2Q64705 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usf2Q64705 Gm24804-201ENSMUST00000174982 85 ntBASIC20.74■□□□□ 0.91
Usf2Q64705 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usf2Q64705 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usf2Q64705 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usf2Q64705 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usf2Q64705 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usf2Q64705 Peli2-204ENSMUST00000226513 1320 ntBASIC20.73■□□□□ 0.91
Usf2Q64705 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usf2Q64705 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usf2Q64705 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usf2Q64705 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usf2Q64705 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usf2Q64705 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usf2Q64705 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usf2Q64705 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usf2Q64705 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usf2Q64705 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.68■□□□□ 0.9
Usf2Q64705 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usf2Q64705 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usf2Q64705 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.67■□□□□ 0.9
Usf2Q64705 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Usf2Q64705 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usf2Q64705 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usf2Q64705 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Usf2Q64705 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usf2Q64705 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usf2Q64705 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usf2Q64705 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usf2Q64705 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usf2Q64705 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usf2Q64705 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usf2Q64705 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usf2Q64705 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usf2Q64705 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usf2Q64705 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Usf2Q64705 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usf2Q64705 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Usf2Q64705 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usf2Q64705 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.58■□□□□ 0.88
Usf2Q64705 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Usf2Q64705 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Usf2Q64705 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usf2Q64705 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usf2Q64705 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usf2Q64705 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Usf2Q64705 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms