Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.12■□□□□ 0.65
Zfp248Q640N4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Zfp248Q640N4 Zxda-201ENSMUST00000117281 2621 ntBASIC19.12■□□□□ 0.65
Zfp248Q640N4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Zfp248Q640N4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.11■□□□□ 0.65
Zfp248Q640N4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zfp248Q640N4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.09■□□□□ 0.65
Zfp248Q640N4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Zfp248Q640N4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Zfp248Q640N4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Zfp248Q640N4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Zfp248Q640N4 Peli2-204ENSMUST00000226513 1320 ntBASIC19.06■□□□□ 0.64
Zfp248Q640N4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zfp248Q640N4 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.05■□□□□ 0.64
Zfp248Q640N4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Zfp248Q640N4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Zfp248Q640N4 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.04■□□□□ 0.64
Zfp248Q640N4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Zfp248Q640N4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Zfp248Q640N4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Zfp248Q640N4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zfp248Q640N4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Zfp248Q640N4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Zfp248Q640N4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Zfp248Q640N4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Zfp248Q640N4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zfp248Q640N4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Zfp248Q640N4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Zfp248Q640N4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Zfp248Q640N4 Gm43445-201ENSMUST00000198564 2091 ntBASIC19■□□□□ 0.63
Zfp248Q640N4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Zfp248Q640N4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Zfp248Q640N4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Zfp248Q640N4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Zfp248Q640N4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Zfp248Q640N4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Zfp248Q640N4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zfp248Q640N4 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.95■□□□□ 0.62
Zfp248Q640N4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Zfp248Q640N4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.95■□□□□ 0.62
Zfp248Q640N4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zfp248Q640N4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Zfp248Q640N4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Zfp248Q640N4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.94■□□□□ 0.62
Zfp248Q640N4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zfp248Q640N4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zfp248Q640N4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Zfp248Q640N4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Zfp248Q640N4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zfp248Q640N4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zfp248Q640N4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zfp248Q640N4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.91■□□□□ 0.62
Zfp248Q640N4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Zfp248Q640N4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Zfp248Q640N4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Zfp248Q640N4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zfp248Q640N4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zfp248Q640N4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Zfp248Q640N4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zfp248Q640N4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zfp248Q640N4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zfp248Q640N4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Zfp248Q640N4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Zfp248Q640N4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zfp248Q640N4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Zfp248Q640N4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zfp248Q640N4 Gm24804-201ENSMUST00000174982 85 ntBASIC18.85■□□□□ 0.61
Zfp248Q640N4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Zfp248Q640N4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Zfp248Q640N4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zfp248Q640N4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp248Q640N4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp248Q640N4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp248Q640N4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zfp248Q640N4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp248Q640N4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp248Q640N4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zfp248Q640N4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Zfp248Q640N4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.8■□□□□ 0.6
Zfp248Q640N4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zfp248Q640N4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp248Q640N4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp248Q640N4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zfp248Q640N4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Zfp248Q640N4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Zfp248Q640N4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Zfp248Q640N4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Zfp248Q640N4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.76■□□□□ 0.59
Zfp248Q640N4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Zfp248Q640N4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Zfp248Q640N4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.76■□□□□ 0.59
Zfp248Q640N4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Zfp248Q640N4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.75■□□□□ 0.59
Zfp248Q640N4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.74■□□□□ 0.59
Zfp248Q640N4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp248Q640N4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp248Q640N4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp248Q640N4 Gm16148-201ENSMUST00000119653 893 ntBASIC18.71■□□□□ 0.59
Zfp248Q640N4 Amer2-203ENSMUST00000225247 2662 ntBASIC18.7■□□□□ 0.58
Zfp248Q640N4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms