Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Rnf20Q5DTM8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Rnf20Q5DTM8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30,22■■■□□ 2,43
Rnf20Q5DTM8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30,22■■■□□ 2,43
Rnf20Q5DTM8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Rnf20Q5DTM8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Rnf20Q5DTM8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30,21■■■□□ 2,43
Rnf20Q5DTM8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30,21■■■□□ 2,43
Rnf20Q5DTM8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30,2■■■□□ 2,43
Rnf20Q5DTM8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Rnf20Q5DTM8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30,19■■■□□ 2,42
Rnf20Q5DTM8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30,19■■■□□ 2,42
Rnf20Q5DTM8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Rnf20Q5DTM8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30,17■■■□□ 2,42
Rnf20Q5DTM8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30,17■■■□□ 2,42
Rnf20Q5DTM8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,17■■■□□ 2,42
Rnf20Q5DTM8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30,16■■■□□ 2,42
Rnf20Q5DTM8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30,16■■■□□ 2,42
Rnf20Q5DTM8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Rnf20Q5DTM8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Rnf20Q5DTM8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30,13■■■□□ 2,41
Rnf20Q5DTM8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
Rnf20Q5DTM8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30,1■■■□□ 2,41
Rnf20Q5DTM8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30,1■■■□□ 2,41
Rnf20Q5DTM8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30,09■■■□□ 2,41
Rnf20Q5DTM8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30,09■■■□□ 2,41
Rnf20Q5DTM8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30,09■■■□□ 2,41
Rnf20Q5DTM8 Gm30346-201ENSMUST00000218641 1699 ntBASIC30,09■■■□□ 2,41
Rnf20Q5DTM8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30,07■■■□□ 2,4
Rnf20Q5DTM8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30,07■■■□□ 2,4
Rnf20Q5DTM8 Gm16148-201ENSMUST00000119653 893 ntBASIC30,07■■■□□ 2,4
Rnf20Q5DTM8 Gm6345-201ENSMUST00000180378 1691 ntBASIC30,07■■■□□ 2,4
Rnf20Q5DTM8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30,05■■■□□ 2,4
Rnf20Q5DTM8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Rnf20Q5DTM8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30,03■■■□□ 2,4
Rnf20Q5DTM8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30,02■■■□□ 2,4
Rnf20Q5DTM8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30,01■■■□□ 2,4
Rnf20Q5DTM8 Zxda-201ENSMUST00000117281 2621 ntBASIC30,01■■■□□ 2,4
Rnf20Q5DTM8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Rnf20Q5DTM8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29,99■■■□□ 2,39
Rnf20Q5DTM8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29,99■■■□□ 2,39
Rnf20Q5DTM8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Rnf20Q5DTM8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29,97■■■□□ 2,39
Rnf20Q5DTM8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Rnf20Q5DTM8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Rnf20Q5DTM8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,39
Rnf20Q5DTM8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29,94■■■□□ 2,38
Rnf20Q5DTM8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Rnf20Q5DTM8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29,94■■■□□ 2,38
Rnf20Q5DTM8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29,93■■■□□ 2,38
Rnf20Q5DTM8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29,93■■■□□ 2,38
Rnf20Q5DTM8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29,91■■■□□ 2,38
Rnf20Q5DTM8 Gm9905-201ENSMUST00000065740 1845 ntBASIC29,89■■■□□ 2,38
Rnf20Q5DTM8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29,89■■■□□ 2,38
Rnf20Q5DTM8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29,89■■■□□ 2,38
Rnf20Q5DTM8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29,87■■■□□ 2,37
Rnf20Q5DTM8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29,84■■■□□ 2,37
Rnf20Q5DTM8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29,83■■■□□ 2,37
Rnf20Q5DTM8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29,83■■■□□ 2,37
Rnf20Q5DTM8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29,83■■■□□ 2,37
Rnf20Q5DTM8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Rnf20Q5DTM8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Rnf20Q5DTM8 Gm6206-201ENSMUST00000133472 2199 ntBASIC29,82■■■□□ 2,36
Rnf20Q5DTM8 Gm43445-201ENSMUST00000198564 2091 ntBASIC29,81■■■□□ 2,36
Rnf20Q5DTM8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29,81■■■□□ 2,36
Rnf20Q5DTM8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29,8■■■□□ 2,36
Rnf20Q5DTM8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29,79■■■□□ 2,36
Rnf20Q5DTM8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29,77■■■□□ 2,36
Rnf20Q5DTM8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29,76■■■□□ 2,36
Rnf20Q5DTM8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29,76■■■□□ 2,35
Rnf20Q5DTM8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29,76■■■□□ 2,35
Rnf20Q5DTM8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29,76■■■□□ 2,35
Rnf20Q5DTM8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29,75■■■□□ 2,35
Rnf20Q5DTM8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29,73■■■□□ 2,35
Rnf20Q5DTM8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Rnf20Q5DTM8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Rnf20Q5DTM8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29,71■■■□□ 2,35
Rnf20Q5DTM8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29,7■■■□□ 2,35
Rnf20Q5DTM8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,35
Rnf20Q5DTM8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,35
Rnf20Q5DTM8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29,69■■■□□ 2,34
Rnf20Q5DTM8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29,69■■■□□ 2,34
Rnf20Q5DTM8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29,68■■■□□ 2,34
Rnf20Q5DTM8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29,68■■■□□ 2,34
Rnf20Q5DTM8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29,67■■■□□ 2,34
Rnf20Q5DTM8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,67■■■□□ 2,34
Rnf20Q5DTM8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29,67■■■□□ 2,34
Rnf20Q5DTM8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29,66■■■□□ 2,34
Rnf20Q5DTM8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29,65■■■□□ 2,34
Rnf20Q5DTM8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29,65■■■□□ 2,34
Rnf20Q5DTM8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,63■■■□□ 2,33
Rnf20Q5DTM8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29,6■■■□□ 2,33
Rnf20Q5DTM8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29,6■■■□□ 2,33
Rnf20Q5DTM8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Rnf20Q5DTM8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29,58■■■□□ 2,33
Rnf20Q5DTM8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29,58■■■□□ 2,33
Rnf20Q5DTM8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29,58■■■□□ 2,33
Rnf20Q5DTM8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29,57■■■□□ 2,32
Rnf20Q5DTM8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29,57■■■□□ 2,32
Rnf20Q5DTM8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29,57■■■□□ 2,32
Retrieved 100 of 76,532 protein–RNA pairs in 13,9 ms