Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rnf20Q5DTM8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rnf20Q5DTM8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Rnf20Q5DTM8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Rnf20Q5DTM8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rnf20Q5DTM8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rnf20Q5DTM8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Rnf20Q5DTM8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
Rnf20Q5DTM8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Rnf20Q5DTM8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Rnf20Q5DTM8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.19■■■□□ 2.42
Rnf20Q5DTM8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rnf20Q5DTM8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rnf20Q5DTM8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Rnf20Q5DTM8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Rnf20Q5DTM8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rnf20Q5DTM8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rnf20Q5DTM8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Rnf20Q5DTM8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rnf20Q5DTM8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Rnf20Q5DTM8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Rnf20Q5DTM8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Rnf20Q5DTM8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.1■■■□□ 2.41
Rnf20Q5DTM8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Rnf20Q5DTM8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Rnf20Q5DTM8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Rnf20Q5DTM8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Rnf20Q5DTM8 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.09■■■□□ 2.41
Rnf20Q5DTM8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Rnf20Q5DTM8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.07■■■□□ 2.4
Rnf20Q5DTM8 Gm16148-201ENSMUST00000119653 893 ntBASIC30.07■■■□□ 2.4
Rnf20Q5DTM8 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.07■■■□□ 2.4
Rnf20Q5DTM8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
Rnf20Q5DTM8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rnf20Q5DTM8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rnf20Q5DTM8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
Rnf20Q5DTM8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Rnf20Q5DTM8 Zxda-201ENSMUST00000117281 2621 ntBASIC30.01■■■□□ 2.4
Rnf20Q5DTM8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rnf20Q5DTM8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Rnf20Q5DTM8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Rnf20Q5DTM8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rnf20Q5DTM8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Rnf20Q5DTM8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rnf20Q5DTM8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rnf20Q5DTM8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rnf20Q5DTM8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Rnf20Q5DTM8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rnf20Q5DTM8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Rnf20Q5DTM8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Rnf20Q5DTM8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.93■■■□□ 2.38
Rnf20Q5DTM8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Rnf20Q5DTM8 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.89■■■□□ 2.38
Rnf20Q5DTM8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Rnf20Q5DTM8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rnf20Q5DTM8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Rnf20Q5DTM8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Rnf20Q5DTM8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
Rnf20Q5DTM8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Rnf20Q5DTM8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rnf20Q5DTM8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Rnf20Q5DTM8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Rnf20Q5DTM8 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.82■■■□□ 2.36
Rnf20Q5DTM8 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.81■■■□□ 2.36
Rnf20Q5DTM8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Rnf20Q5DTM8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
Rnf20Q5DTM8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rnf20Q5DTM8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.77■■■□□ 2.36
Rnf20Q5DTM8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.36
Rnf20Q5DTM8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.76■■■□□ 2.35
Rnf20Q5DTM8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Rnf20Q5DTM8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rnf20Q5DTM8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rnf20Q5DTM8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Rnf20Q5DTM8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rnf20Q5DTM8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rnf20Q5DTM8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Rnf20Q5DTM8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Rnf20Q5DTM8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Rnf20Q5DTM8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Rnf20Q5DTM8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Rnf20Q5DTM8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Rnf20Q5DTM8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Rnf20Q5DTM8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
Rnf20Q5DTM8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Rnf20Q5DTM8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rnf20Q5DTM8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rnf20Q5DTM8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Rnf20Q5DTM8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Rnf20Q5DTM8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
Rnf20Q5DTM8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rnf20Q5DTM8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
Rnf20Q5DTM8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Rnf20Q5DTM8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rnf20Q5DTM8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Rnf20Q5DTM8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Rnf20Q5DTM8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.58■■■□□ 2.33
Rnf20Q5DTM8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.57■■■□□ 2.32
Rnf20Q5DTM8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.57■■■□□ 2.32
Rnf20Q5DTM8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms