Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Usp48Q3V0C5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Usp48Q3V0C5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Usp48Q3V0C5 Gm8503-201ENSMUST00000118131 455 ntBASIC31.59■■■□□ 2.65
Usp48Q3V0C5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.59■■■□□ 2.65
Usp48Q3V0C5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Usp48Q3V0C5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.55■■■□□ 2.64
Usp48Q3V0C5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Usp48Q3V0C5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Usp48Q3V0C5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Usp48Q3V0C5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Usp48Q3V0C5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Usp48Q3V0C5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Usp48Q3V0C5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Usp48Q3V0C5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Usp48Q3V0C5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
Usp48Q3V0C5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.43■■■□□ 2.62
Usp48Q3V0C5 Gm6821-201ENSMUST00000107540 542 ntBASIC31.42■■■□□ 2.62
Usp48Q3V0C5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.42■■■□□ 2.62
Usp48Q3V0C5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Usp48Q3V0C5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.4■■■□□ 2.62
Usp48Q3V0C5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Usp48Q3V0C5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Usp48Q3V0C5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Usp48Q3V0C5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Usp48Q3V0C5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
Usp48Q3V0C5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.33■■■□□ 2.61
Usp48Q3V0C5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Usp48Q3V0C5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Usp48Q3V0C5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Usp48Q3V0C5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Usp48Q3V0C5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Usp48Q3V0C5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Usp48Q3V0C5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Usp48Q3V0C5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Usp48Q3V0C5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Usp48Q3V0C5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Usp48Q3V0C5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Usp48Q3V0C5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.16■■■□□ 2.58
Usp48Q3V0C5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Usp48Q3V0C5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Usp48Q3V0C5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Usp48Q3V0C5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.13■■■□□ 2.57
Usp48Q3V0C5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
Usp48Q3V0C5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Usp48Q3V0C5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.11■■■□□ 2.57
Usp48Q3V0C5 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.11■■■□□ 2.57
Usp48Q3V0C5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
Usp48Q3V0C5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Usp48Q3V0C5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Usp48Q3V0C5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Usp48Q3V0C5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Usp48Q3V0C5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Usp48Q3V0C5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Usp48Q3V0C5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Usp48Q3V0C5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Usp48Q3V0C5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
Usp48Q3V0C5 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.03■■■□□ 2.56
Usp48Q3V0C5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Usp48Q3V0C5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31■■■□□ 2.55
Usp48Q3V0C5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Usp48Q3V0C5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Usp48Q3V0C5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.96■■■□□ 2.55
Usp48Q3V0C5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Usp48Q3V0C5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.94■■■□□ 2.54
Usp48Q3V0C5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Usp48Q3V0C5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Usp48Q3V0C5 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.92■■■□□ 2.54
Usp48Q3V0C5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Usp48Q3V0C5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Usp48Q3V0C5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Usp48Q3V0C5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Usp48Q3V0C5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Usp48Q3V0C5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.9■■■□□ 2.54
Usp48Q3V0C5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Usp48Q3V0C5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.86■■■□□ 2.53
Usp48Q3V0C5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Usp48Q3V0C5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.83■■■□□ 2.53
Usp48Q3V0C5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Usp48Q3V0C5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
Usp48Q3V0C5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Usp48Q3V0C5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Usp48Q3V0C5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Usp48Q3V0C5 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.81■■■□□ 2.52
Usp48Q3V0C5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.8■■■□□ 2.52
Usp48Q3V0C5 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.8■■■□□ 2.52
Usp48Q3V0C5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.79■■■□□ 2.52
Usp48Q3V0C5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Usp48Q3V0C5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Usp48Q3V0C5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Usp48Q3V0C5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.76■■■□□ 2.51
Usp48Q3V0C5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Usp48Q3V0C5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Usp48Q3V0C5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
Usp48Q3V0C5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.71■■■□□ 2.51
Usp48Q3V0C5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Usp48Q3V0C5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
Usp48Q3V0C5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.69■■■□□ 2.5
Usp48Q3V0C5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.69■■■□□ 2.5
Usp48Q3V0C5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.69■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms