Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Carmil3Q3UFQ8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
Carmil3Q3UFQ8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Carmil3Q3UFQ8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Carmil3Q3UFQ8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.36■■■□□ 2.61
Carmil3Q3UFQ8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Carmil3Q3UFQ8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Carmil3Q3UFQ8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Carmil3Q3UFQ8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Carmil3Q3UFQ8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Carmil3Q3UFQ8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Carmil3Q3UFQ8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.29■■■□□ 2.6
Carmil3Q3UFQ8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.28■■■□□ 2.6
Carmil3Q3UFQ8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Carmil3Q3UFQ8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
Carmil3Q3UFQ8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.25■■■□□ 2.59
Carmil3Q3UFQ8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.25■■■□□ 2.59
Carmil3Q3UFQ8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Carmil3Q3UFQ8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Carmil3Q3UFQ8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Carmil3Q3UFQ8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Carmil3Q3UFQ8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Carmil3Q3UFQ8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Carmil3Q3UFQ8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Carmil3Q3UFQ8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.2■■■□□ 2.59
Carmil3Q3UFQ8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Carmil3Q3UFQ8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.16■■■□□ 2.58
Carmil3Q3UFQ8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Carmil3Q3UFQ8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.15■■■□□ 2.58
Carmil3Q3UFQ8 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.15■■■□□ 2.58
Carmil3Q3UFQ8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Carmil3Q3UFQ8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.15■■■□□ 2.58
Carmil3Q3UFQ8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Carmil3Q3UFQ8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Carmil3Q3UFQ8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Carmil3Q3UFQ8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Carmil3Q3UFQ8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Carmil3Q3UFQ8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Carmil3Q3UFQ8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Carmil3Q3UFQ8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.03■■■□□ 2.56
Carmil3Q3UFQ8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Carmil3Q3UFQ8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Carmil3Q3UFQ8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31■■■□□ 2.55
Carmil3Q3UFQ8 Gm43863-201ENSMUST00000203822 1192 ntBASIC31■■■□□ 2.55
Carmil3Q3UFQ8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.99■■■□□ 2.55
Carmil3Q3UFQ8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Carmil3Q3UFQ8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Carmil3Q3UFQ8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Carmil3Q3UFQ8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Carmil3Q3UFQ8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Carmil3Q3UFQ8 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.95■■■□□ 2.55
Carmil3Q3UFQ8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Carmil3Q3UFQ8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Carmil3Q3UFQ8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Carmil3Q3UFQ8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
Carmil3Q3UFQ8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.92■■■□□ 2.54
Carmil3Q3UFQ8 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.91■■■□□ 2.54
Carmil3Q3UFQ8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
Carmil3Q3UFQ8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Carmil3Q3UFQ8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.9■■■□□ 2.54
Carmil3Q3UFQ8 Gm8503-201ENSMUST00000118131 455 ntBASIC30.89■■■□□ 2.54
Carmil3Q3UFQ8 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.87■■■□□ 2.53
Carmil3Q3UFQ8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Carmil3Q3UFQ8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.85■■■□□ 2.53
Carmil3Q3UFQ8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Carmil3Q3UFQ8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Carmil3Q3UFQ8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Carmil3Q3UFQ8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Carmil3Q3UFQ8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Carmil3Q3UFQ8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Carmil3Q3UFQ8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Carmil3Q3UFQ8 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.8■■■□□ 2.52
Carmil3Q3UFQ8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.79■■■□□ 2.52
Carmil3Q3UFQ8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Carmil3Q3UFQ8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Carmil3Q3UFQ8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Carmil3Q3UFQ8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Carmil3Q3UFQ8 Gm6821-201ENSMUST00000107540 542 ntBASIC30.78■■■□□ 2.52
Carmil3Q3UFQ8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Carmil3Q3UFQ8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Carmil3Q3UFQ8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
Carmil3Q3UFQ8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Carmil3Q3UFQ8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.74■■■□□ 2.51
Carmil3Q3UFQ8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
Carmil3Q3UFQ8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
Carmil3Q3UFQ8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.7■■■□□ 2.51
Carmil3Q3UFQ8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Carmil3Q3UFQ8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Carmil3Q3UFQ8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Carmil3Q3UFQ8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Carmil3Q3UFQ8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
Carmil3Q3UFQ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Carmil3Q3UFQ8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Carmil3Q3UFQ8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Carmil3Q3UFQ8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Carmil3Q3UFQ8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Carmil3Q3UFQ8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Carmil3Q3UFQ8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Carmil3Q3UFQ8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Carmil3Q3UFQ8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms