Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm6821-201ENSMUST00000107540 542 ntBASIC19.5■□□□□ 0.71
Hspg2Q05793 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hspg2Q05793 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Hspg2Q05793 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hspg2Q05793 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hspg2Q05793 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hspg2Q05793 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hspg2Q05793 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hspg2Q05793 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hspg2Q05793 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.43■□□□□ 0.7
Hspg2Q05793 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hspg2Q05793 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.41■□□□□ 0.7
Hspg2Q05793 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hspg2Q05793 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hspg2Q05793 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Hspg2Q05793 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hspg2Q05793 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hspg2Q05793 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hspg2Q05793 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.37■□□□□ 0.69
Hspg2Q05793 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hspg2Q05793 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.35■□□□□ 0.69
Hspg2Q05793 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hspg2Q05793 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hspg2Q05793 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hspg2Q05793 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Hspg2Q05793 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hspg2Q05793 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hspg2Q05793 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.32■□□□□ 0.68
Hspg2Q05793 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Hspg2Q05793 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hspg2Q05793 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hspg2Q05793 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hspg2Q05793 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hspg2Q05793 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hspg2Q05793 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hspg2Q05793 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hspg2Q05793 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hspg2Q05793 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hspg2Q05793 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hspg2Q05793 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hspg2Q05793 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hspg2Q05793 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.24■□□□□ 0.67
Hspg2Q05793 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hspg2Q05793 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.23■□□□□ 0.67
Hspg2Q05793 Mir6538-201ENSMUST00000183713 110 ntBASIC19.23■□□□□ 0.67
Hspg2Q05793 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.22■□□□□ 0.67
Hspg2Q05793 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.21■□□□□ 0.67
Hspg2Q05793 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Hspg2Q05793 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.2■□□□□ 0.66
Hspg2Q05793 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hspg2Q05793 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hspg2Q05793 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Hspg2Q05793 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.17■□□□□ 0.66
Hspg2Q05793 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hspg2Q05793 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hspg2Q05793 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hspg2Q05793 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hspg2Q05793 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.16■□□□□ 0.66
Hspg2Q05793 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.16■□□□□ 0.66
Hspg2Q05793 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Hspg2Q05793 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hspg2Q05793 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hspg2Q05793 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hspg2Q05793 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.15■□□□□ 0.66
Hspg2Q05793 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hspg2Q05793 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hspg2Q05793 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Hspg2Q05793 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.14■□□□□ 0.65
Hspg2Q05793 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hspg2Q05793 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hspg2Q05793 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Hspg2Q05793 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hspg2Q05793 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hspg2Q05793 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hspg2Q05793 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hspg2Q05793 Gm7432-201ENSMUST00000210343 879 ntBASIC19.11■□□□□ 0.65
Hspg2Q05793 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.1■□□□□ 0.65
Hspg2Q05793 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hspg2Q05793 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hspg2Q05793 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.08■□□□□ 0.65
Hspg2Q05793 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hspg2Q05793 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hspg2Q05793 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hspg2Q05793 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hspg2Q05793 Gm11175-201ENSMUST00000116172 543 ntBASIC19.07■□□□□ 0.64
Hspg2Q05793 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hspg2Q05793 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hspg2Q05793 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Hspg2Q05793 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hspg2Q05793 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hspg2Q05793 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hspg2Q05793 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hspg2Q05793 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hspg2Q05793 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hspg2Q05793 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hspg2Q05793 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hspg2Q05793 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hspg2Q05793 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.99■□□□□ 0.63
Hspg2Q05793 Cap2-205ENSMUST00000225824 1634 ntBASIC18.98■□□□□ 0.63
Hspg2Q05793 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms