Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nkx3-2P97503 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.84■■□□□ 1.41
Nkx3-2P97503 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nkx3-2P97503 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Nkx3-2P97503 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Nkx3-2P97503 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Nkx3-2P97503 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nkx3-2P97503 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nkx3-2P97503 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Nkx3-2P97503 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
Nkx3-2P97503 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.81■■□□□ 1.4
Nkx3-2P97503 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Nkx3-2P97503 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx3-2P97503 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx3-2P97503 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx3-2P97503 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.77■■□□□ 1.4
Nkx3-2P97503 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.77■■□□□ 1.4
Nkx3-2P97503 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.76■■□□□ 1.39
Nkx3-2P97503 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx3-2P97503 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nkx3-2P97503 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Nkx3-2P97503 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx3-2P97503 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
Nkx3-2P97503 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.73■■□□□ 1.39
Nkx3-2P97503 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.73■■□□□ 1.39
Nkx3-2P97503 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx3-2P97503 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nkx3-2P97503 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Nkx3-2P97503 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.7■■□□□ 1.38
Nkx3-2P97503 Gm24970-201ENSMUST00000175582 82 ntBASIC23.7■■□□□ 1.38
Nkx3-2P97503 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nkx3-2P97503 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx3-2P97503 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx3-2P97503 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Nkx3-2P97503 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Nkx3-2P97503 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Nkx3-2P97503 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Nkx3-2P97503 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Nkx3-2P97503 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Nkx3-2P97503 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.64■■□□□ 1.38
Nkx3-2P97503 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Nkx3-2P97503 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nkx3-2P97503 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nkx3-2P97503 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nkx3-2P97503 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.62■■□□□ 1.37
Nkx3-2P97503 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Nkx3-2P97503 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nkx3-2P97503 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nkx3-2P97503 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Nkx3-2P97503 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
Nkx3-2P97503 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Nkx3-2P97503 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Nkx3-2P97503 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.61■■□□□ 1.37
Nkx3-2P97503 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Nkx3-2P97503 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.6■■□□□ 1.37
Nkx3-2P97503 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.6■■□□□ 1.37
Nkx3-2P97503 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Nkx3-2P97503 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.58■■□□□ 1.37
Nkx3-2P97503 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Nkx3-2P97503 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Nkx3-2P97503 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Nkx3-2P97503 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Nkx3-2P97503 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Nkx3-2P97503 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Nkx3-2P97503 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Nkx3-2P97503 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Nkx3-2P97503 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nkx3-2P97503 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Nkx3-2P97503 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Nkx3-2P97503 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Nkx3-2P97503 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Nkx3-2P97503 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Nkx3-2P97503 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.49■■□□□ 1.35
Nkx3-2P97503 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Nkx3-2P97503 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Nkx3-2P97503 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Nkx3-2P97503 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Nkx3-2P97503 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Nkx3-2P97503 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Nkx3-2P97503 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Nkx3-2P97503 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Nkx3-2P97503 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Nkx3-2P97503 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.44■■□□□ 1.34
Nkx3-2P97503 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Nkx3-2P97503 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.42■■□□□ 1.34
Nkx3-2P97503 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nkx3-2P97503 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Nkx3-2P97503 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Nkx3-2P97503 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Nkx3-2P97503 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.41■■□□□ 1.34
Nkx3-2P97503 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.39■■□□□ 1.33
Nkx3-2P97503 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nkx3-2P97503 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Nkx3-2P97503 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.38■■□□□ 1.33
Nkx3-2P97503 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.37■■□□□ 1.33
Nkx3-2P97503 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nkx3-2P97503 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nkx3-2P97503 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Nkx3-2P97503 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx3-2P97503 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms