Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Lhx1P63006 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Lhx1P63006 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Lhx1P63006 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Lhx1P63006 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Lhx1P63006 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Lhx1P63006 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Lhx1P63006 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Lhx1P63006 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Lhx1P63006 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Lhx1P63006 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Lhx1P63006 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Lhx1P63006 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Lhx1P63006 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Lhx1P63006 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Lhx1P63006 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Lhx1P63006 Gm45855-201ENSMUST00000212546 880 ntBASIC25.12■■□□□ 1.61
Lhx1P63006 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Lhx1P63006 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.11■■□□□ 1.61
Lhx1P63006 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Lhx1P63006 Gm9397-201ENSMUST00000200125 605 ntBASIC25.1■■□□□ 1.61
Lhx1P63006 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Lhx1P63006 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.09■■□□□ 1.61
Lhx1P63006 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
Lhx1P63006 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Lhx1P63006 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.07■■□□□ 1.6
Lhx1P63006 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lhx1P63006 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lhx1P63006 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Lhx1P63006 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Lhx1P63006 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Lhx1P63006 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Lhx1P63006 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lhx1P63006 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lhx1P63006 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lhx1P63006 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Lhx1P63006 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Lhx1P63006 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.99■■□□□ 1.59
Lhx1P63006 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Lhx1P63006 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.98■■□□□ 1.59
Lhx1P63006 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.97■■□□□ 1.59
Lhx1P63006 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lhx1P63006 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Lhx1P63006 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.94■■□□□ 1.58
Lhx1P63006 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
Lhx1P63006 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.93■■□□□ 1.58
Lhx1P63006 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.93■■□□□ 1.58
Lhx1P63006 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lhx1P63006 Gm24970-201ENSMUST00000175582 82 ntBASIC24.92■■□□□ 1.58
Lhx1P63006 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Lhx1P63006 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lhx1P63006 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Lhx1P63006 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Lhx1P63006 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Lhx1P63006 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Lhx1P63006 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Lhx1P63006 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.9■■□□□ 1.58
Lhx1P63006 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.89■■□□□ 1.58
Lhx1P63006 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Lhx1P63006 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Lhx1P63006 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Lhx1P63006 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Lhx1P63006 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Lhx1P63006 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Lhx1P63006 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Lhx1P63006 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.84■■□□□ 1.57
Lhx1P63006 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
Lhx1P63006 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Lhx1P63006 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Lhx1P63006 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
Lhx1P63006 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Lhx1P63006 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Lhx1P63006 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.8■■□□□ 1.56
Lhx1P63006 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Lhx1P63006 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Lhx1P63006 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Lhx1P63006 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Lhx1P63006 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Lhx1P63006 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Lhx1P63006 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Lhx1P63006 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.76■■□□□ 1.55
Lhx1P63006 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Lhx1P63006 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lhx1P63006 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.75■■□□□ 1.55
Lhx1P63006 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lhx1P63006 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lhx1P63006 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Lhx1P63006 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Lhx1P63006 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.71■■□□□ 1.55
Lhx1P63006 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Lhx1P63006 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Lhx1P63006 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Lhx1P63006 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.69■■□□□ 1.54
Lhx1P63006 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Lhx1P63006 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 622.6 ms