Protein–RNA interactions for Protein: P32972

Tnfsf8, Tumor necrosis factor ligand superfamily member 8, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf8P32972 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf8P32972 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf8P32972 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf8P32972 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf8P32972 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf8P32972 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf8P32972 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf8P32972 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf8P32972 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf8P32972 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf8P32972 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf8P32972 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Tnfsf8P32972 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsf8P32972 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf8P32972 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tnfsf8P32972 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf8P32972 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf8P32972 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf8P32972 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfsf8P32972 Amer2-203ENSMUST00000225247 2662 ntBASIC20.58■□□□□ 0.89
Tnfsf8P32972 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfsf8P32972 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfsf8P32972 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfsf8P32972 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.56■□□□□ 0.88
Tnfsf8P32972 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsf8P32972 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfsf8P32972 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Tnfsf8P32972 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsf8P32972 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsf8P32972 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsf8P32972 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsf8P32972 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.53■□□□□ 0.88
Tnfsf8P32972 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsf8P32972 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfsf8P32972 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.52■□□□□ 0.88
Tnfsf8P32972 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfsf8P32972 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsf8P32972 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsf8P32972 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsf8P32972 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfsf8P32972 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Tnfsf8P32972 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfsf8P32972 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
Tnfsf8P32972 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfsf8P32972 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfsf8P32972 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Tnfsf8P32972 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfsf8P32972 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfsf8P32972 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfsf8P32972 Gm8109-201ENSMUST00000194076 746 ntBASIC20.46■□□□□ 0.87
Tnfsf8P32972 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfsf8P32972 Gm26115-201ENSMUST00000175605 87 ntBASIC20.45■□□□□ 0.86
Tnfsf8P32972 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.44■□□□□ 0.86
Tnfsf8P32972 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfsf8P32972 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfsf8P32972 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsf8P32972 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsf8P32972 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsf8P32972 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Tnfsf8P32972 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfsf8P32972 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.41■□□□□ 0.86
Tnfsf8P32972 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsf8P32972 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsf8P32972 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfsf8P32972 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.4■□□□□ 0.86
Tnfsf8P32972 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfsf8P32972 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfsf8P32972 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.39■□□□□ 0.85
Tnfsf8P32972 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tnfsf8P32972 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.38■□□□□ 0.85
Tnfsf8P32972 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tnfsf8P32972 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfsf8P32972 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfsf8P32972 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf8P32972 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf8P32972 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf8P32972 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf8P32972 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf8P32972 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf8P32972 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Tnfsf8P32972 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfsf8P32972 Peli2-204ENSMUST00000226513 1320 ntBASIC20.35■□□□□ 0.85
Tnfsf8P32972 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Tnfsf8P32972 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfsf8P32972 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfsf8P32972 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfsf8P32972 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfsf8P32972 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfsf8P32972 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.32■□□□□ 0.84
Tnfsf8P32972 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfsf8P32972 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfsf8P32972 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfsf8P32972 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfsf8P32972 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfsf8P32972 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfsf8P32972 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Tnfsf8P32972 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfsf8P32972 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfsf8P32972 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfsf8P32972 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms