Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.69■□□□□ 0.9
Fn1P11276 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Fn1P11276 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fn1P11276 Gm11175-201ENSMUST00000116172 543 ntBASIC20.68■□□□□ 0.9
Fn1P11276 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Fn1P11276 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Fn1P11276 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.67■□□□□ 0.9
Fn1P11276 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.66■□□□□ 0.9
Fn1P11276 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fn1P11276 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Fn1P11276 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.64■□□□□ 0.89
Fn1P11276 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fn1P11276 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Fn1P11276 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fn1P11276 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fn1P11276 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fn1P11276 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fn1P11276 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Fn1P11276 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fn1P11276 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.57■□□□□ 0.88
Fn1P11276 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fn1P11276 Cap2-205ENSMUST00000225824 1634 ntBASIC20.56■□□□□ 0.88
Fn1P11276 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.56■□□□□ 0.88
Fn1P11276 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.56■□□□□ 0.88
Fn1P11276 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fn1P11276 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fn1P11276 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fn1P11276 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fn1P11276 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fn1P11276 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fn1P11276 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fn1P11276 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fn1P11276 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fn1P11276 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fn1P11276 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.51■□□□□ 0.87
Fn1P11276 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fn1P11276 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fn1P11276 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fn1P11276 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fn1P11276 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fn1P11276 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.49■□□□□ 0.87
Fn1P11276 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fn1P11276 Gm11599-201ENSMUST00000118720 878 ntBASIC20.48■□□□□ 0.87
Fn1P11276 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fn1P11276 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fn1P11276 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fn1P11276 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Fn1P11276 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fn1P11276 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fn1P11276 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Fn1P11276 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.41■□□□□ 0.86
Fn1P11276 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Fn1P11276 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Fn1P11276 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.36■□□□□ 0.85
Fn1P11276 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Fn1P11276 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fn1P11276 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fn1P11276 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Fn1P11276 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fn1P11276 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fn1P11276 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Fn1P11276 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Fn1P11276 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fn1P11276 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fn1P11276 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fn1P11276 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fn1P11276 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.3■□□□□ 0.84
Fn1P11276 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.29■□□□□ 0.84
Fn1P11276 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fn1P11276 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fn1P11276 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Fn1P11276 Nkain2-201ENSMUST00000092602 558 ntBASIC20.28■□□□□ 0.84
Fn1P11276 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fn1P11276 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Fn1P11276 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Fn1P11276 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fn1P11276 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Fn1P11276 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.25■□□□□ 0.83
Fn1P11276 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fn1P11276 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Fn1P11276 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fn1P11276 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Fn1P11276 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fn1P11276 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fn1P11276 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fn1P11276 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.18■□□□□ 0.82
Fn1P11276 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Fn1P11276 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fn1P11276 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fn1P11276 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.16■□□□□ 0.82
Fn1P11276 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.15■□□□□ 0.82
Fn1P11276 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.15■□□□□ 0.82
Fn1P11276 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fn1P11276 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fn1P11276 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms