Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tuba1bP05213 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tuba1bP05213 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tuba1bP05213 Mipep-204ENSMUST00000225043 1548 ntBASIC23.14■■□□□ 1.3
Tuba1bP05213 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Tuba1bP05213 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Tuba1bP05213 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Tuba1bP05213 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tuba1bP05213 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tuba1bP05213 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Tuba1bP05213 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tuba1bP05213 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tuba1bP05213 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Tuba1bP05213 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Tuba1bP05213 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tuba1bP05213 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tuba1bP05213 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.09■■□□□ 1.29
Tuba1bP05213 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.09■■□□□ 1.29
Tuba1bP05213 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.09■■□□□ 1.29
Tuba1bP05213 Amer2-203ENSMUST00000225247 2662 ntBASIC23.09■■□□□ 1.29
Tuba1bP05213 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tuba1bP05213 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tuba1bP05213 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Tuba1bP05213 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Tuba1bP05213 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Tuba1bP05213 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tuba1bP05213 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tuba1bP05213 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tuba1bP05213 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tuba1bP05213 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Tuba1bP05213 Gm24804-201ENSMUST00000174982 85 ntBASIC22.99■■□□□ 1.27
Tuba1bP05213 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Tuba1bP05213 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.99■■□□□ 1.27
Tuba1bP05213 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tuba1bP05213 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tuba1bP05213 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tuba1bP05213 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tuba1bP05213 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tuba1bP05213 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Tuba1bP05213 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.96■■□□□ 1.27
Tuba1bP05213 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Tuba1bP05213 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tuba1bP05213 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Tuba1bP05213 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tuba1bP05213 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Tuba1bP05213 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Tuba1bP05213 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tuba1bP05213 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tuba1bP05213 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tuba1bP05213 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Tuba1bP05213 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Tuba1bP05213 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tuba1bP05213 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Tuba1bP05213 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tuba1bP05213 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.87■■□□□ 1.25
Tuba1bP05213 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Tuba1bP05213 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.85■■□□□ 1.25
Tuba1bP05213 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Tuba1bP05213 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Tuba1bP05213 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Tuba1bP05213 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Tuba1bP05213 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Tuba1bP05213 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tuba1bP05213 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Tuba1bP05213 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tuba1bP05213 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Tuba1bP05213 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Tuba1bP05213 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tuba1bP05213 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tuba1bP05213 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tuba1bP05213 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tuba1bP05213 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.78■■□□□ 1.24
Tuba1bP05213 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tuba1bP05213 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tuba1bP05213 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tuba1bP05213 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Tuba1bP05213 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tuba1bP05213 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.75■■□□□ 1.23
Tuba1bP05213 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tuba1bP05213 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Tuba1bP05213 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.74■■□□□ 1.23
Tuba1bP05213 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Tuba1bP05213 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tuba1bP05213 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Tuba1bP05213 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tuba1bP05213 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Tuba1bP05213 Peli2-204ENSMUST00000226513 1320 ntBASIC22.71■■□□□ 1.23
Tuba1bP05213 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tuba1bP05213 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tuba1bP05213 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.7■■□□□ 1.22
Tuba1bP05213 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tuba1bP05213 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tuba1bP05213 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tuba1bP05213 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Tuba1bP05213 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tuba1bP05213 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tuba1bP05213 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Tuba1bP05213 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.65■■□□□ 1.22
Tuba1bP05213 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Tuba1bP05213 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms