Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sh2d1aO88890 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d1aO88890 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sh2d1aO88890 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.65■□□□□ 0.42
Sh2d1aO88890 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.65■□□□□ 0.42
Sh2d1aO88890 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.65■□□□□ 0.42
Sh2d1aO88890 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sh2d1aO88890 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Sh2d1aO88890 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d1aO88890 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d1aO88890 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sh2d1aO88890 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d1aO88890 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh2d1aO88890 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.61■□□□□ 0.41
Sh2d1aO88890 Gm24804-201ENSMUST00000174982 85 ntBASIC17.6■□□□□ 0.41
Sh2d1aO88890 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh2d1aO88890 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.6■□□□□ 0.41
Sh2d1aO88890 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh2d1aO88890 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sh2d1aO88890 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh2d1aO88890 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Sh2d1aO88890 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Sh2d1aO88890 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh2d1aO88890 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh2d1aO88890 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sh2d1aO88890 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh2d1aO88890 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh2d1aO88890 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh2d1aO88890 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sh2d1aO88890 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh2d1aO88890 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.52■□□□□ 0.4
Sh2d1aO88890 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Sh2d1aO88890 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sh2d1aO88890 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh2d1aO88890 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh2d1aO88890 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh2d1aO88890 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh2d1aO88890 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sh2d1aO88890 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh2d1aO88890 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh2d1aO88890 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh2d1aO88890 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh2d1aO88890 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh2d1aO88890 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh2d1aO88890 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh2d1aO88890 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh2d1aO88890 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh2d1aO88890 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh2d1aO88890 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Sh2d1aO88890 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sh2d1aO88890 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh2d1aO88890 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d1aO88890 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d1aO88890 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d1aO88890 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.45■□□□□ 0.38
Sh2d1aO88890 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d1aO88890 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sh2d1aO88890 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d1aO88890 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh2d1aO88890 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.44■□□□□ 0.38
Sh2d1aO88890 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sh2d1aO88890 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh2d1aO88890 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sh2d1aO88890 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.44■□□□□ 0.38
Sh2d1aO88890 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.43■□□□□ 0.38
Sh2d1aO88890 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d1aO88890 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh2d1aO88890 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sh2d1aO88890 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.42■□□□□ 0.38
Sh2d1aO88890 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sh2d1aO88890 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d1aO88890 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d1aO88890 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.41■□□□□ 0.38
Sh2d1aO88890 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d1aO88890 Gm16148-201ENSMUST00000119653 893 ntBASIC17.4■□□□□ 0.38
Sh2d1aO88890 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d1aO88890 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d1aO88890 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d1aO88890 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sh2d1aO88890 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sh2d1aO88890 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.39■□□□□ 0.37
Sh2d1aO88890 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sh2d1aO88890 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d1aO88890 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d1aO88890 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d1aO88890 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d1aO88890 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d1aO88890 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d1aO88890 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1aO88890 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d1aO88890 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh2d1aO88890 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d1aO88890 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d1aO88890 Amer2-203ENSMUST00000225247 2662 ntBASIC17.32■□□□□ 0.36
Sh2d1aO88890 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh2d1aO88890 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d1aO88890 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh2d1aO88890 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d1aO88890 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d1aO88890 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms