Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Becn1O88597 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Becn1O88597 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Becn1O88597 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.58■■■□□ 2.17
Becn1O88597 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Becn1O88597 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Becn1O88597 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Becn1O88597 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Becn1O88597 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.55■■■□□ 2.16
Becn1O88597 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Becn1O88597 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Becn1O88597 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Becn1O88597 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Becn1O88597 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Becn1O88597 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.47■■■□□ 2.15
Becn1O88597 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Becn1O88597 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Becn1O88597 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Becn1O88597 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Becn1O88597 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Becn1O88597 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Becn1O88597 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Becn1O88597 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Becn1O88597 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.42■■■□□ 2.14
Becn1O88597 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Becn1O88597 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Becn1O88597 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Becn1O88597 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.4■■■□□ 2.14
Becn1O88597 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Becn1O88597 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Becn1O88597 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Becn1O88597 Gm26115-201ENSMUST00000175605 87 ntBASIC28.36■■■□□ 2.13
Becn1O88597 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Becn1O88597 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.36■■■□□ 2.13
Becn1O88597 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Becn1O88597 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Becn1O88597 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Becn1O88597 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Becn1O88597 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Becn1O88597 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Becn1O88597 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Becn1O88597 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Becn1O88597 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
Becn1O88597 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Becn1O88597 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Becn1O88597 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.27■■■□□ 2.12
Becn1O88597 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Becn1O88597 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Becn1O88597 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Becn1O88597 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Becn1O88597 Gm8109-201ENSMUST00000194076 746 ntBASIC28.24■■■□□ 2.11
Becn1O88597 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Becn1O88597 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Becn1O88597 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Becn1O88597 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Becn1O88597 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Becn1O88597 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Becn1O88597 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.19■■■□□ 2.1
Becn1O88597 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Becn1O88597 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.18■■■□□ 2.1
Becn1O88597 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Becn1O88597 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Becn1O88597 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Becn1O88597 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Becn1O88597 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Becn1O88597 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Becn1O88597 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Becn1O88597 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Becn1O88597 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Becn1O88597 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Becn1O88597 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
Becn1O88597 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Becn1O88597 Gm27322-201ENSMUST00000184007 104 ntBASIC28.06■■■□□ 2.08
Becn1O88597 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Becn1O88597 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Becn1O88597 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
Becn1O88597 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Becn1O88597 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Becn1O88597 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.02■■■□□ 2.08
Becn1O88597 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Becn1O88597 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Becn1O88597 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
Becn1O88597 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Becn1O88597 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.99■■■□□ 2.07
Becn1O88597 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
Becn1O88597 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.98■■■□□ 2.07
Becn1O88597 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Becn1O88597 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Becn1O88597 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Becn1O88597 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Becn1O88597 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Becn1O88597 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Becn1O88597 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Becn1O88597 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.94■■■□□ 2.06
Becn1O88597 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
Becn1O88597 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Becn1O88597 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Becn1O88597 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Becn1O88597 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Becn1O88597 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms