Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Efnb3O35393 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Efnb3O35393 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Efnb3O35393 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.84■□□□□ 0.77
Efnb3O35393 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Efnb3O35393 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Efnb3O35393 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Efnb3O35393 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Efnb3O35393 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Efnb3O35393 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Efnb3O35393 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Efnb3O35393 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Efnb3O35393 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Efnb3O35393 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Efnb3O35393 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Efnb3O35393 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Efnb3O35393 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Efnb3O35393 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Efnb3O35393 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.78■□□□□ 0.76
Efnb3O35393 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Efnb3O35393 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Efnb3O35393 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.77■□□□□ 0.75
Efnb3O35393 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.76■□□□□ 0.75
Efnb3O35393 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Efnb3O35393 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Efnb3O35393 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Efnb3O35393 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Efnb3O35393 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.73■□□□□ 0.75
Efnb3O35393 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Efnb3O35393 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Efnb3O35393 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Efnb3O35393 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Efnb3O35393 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.7■□□□□ 0.74
Efnb3O35393 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Efnb3O35393 Gm26115-201ENSMUST00000175605 87 ntBASIC19.7■□□□□ 0.74
Efnb3O35393 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Efnb3O35393 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Efnb3O35393 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Efnb3O35393 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Efnb3O35393 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Efnb3O35393 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Efnb3O35393 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Efnb3O35393 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Efnb3O35393 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Efnb3O35393 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.66■□□□□ 0.74
Efnb3O35393 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Efnb3O35393 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Efnb3O35393 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Efnb3O35393 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Efnb3O35393 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Efnb3O35393 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Efnb3O35393 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Efnb3O35393 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Efnb3O35393 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Efnb3O35393 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Efnb3O35393 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.63■□□□□ 0.73
Efnb3O35393 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Efnb3O35393 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Efnb3O35393 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Efnb3O35393 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Efnb3O35393 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Efnb3O35393 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.6■□□□□ 0.73
Efnb3O35393 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Efnb3O35393 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Efnb3O35393 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Efnb3O35393 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Efnb3O35393 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.59■□□□□ 0.73
Efnb3O35393 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Efnb3O35393 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Efnb3O35393 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Efnb3O35393 Gm27322-201ENSMUST00000184007 104 ntBASIC19.57■□□□□ 0.72
Efnb3O35393 Gm8109-201ENSMUST00000194076 746 ntBASIC19.57■□□□□ 0.72
Efnb3O35393 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Efnb3O35393 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Efnb3O35393 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.56■□□□□ 0.72
Efnb3O35393 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Efnb3O35393 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Efnb3O35393 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.56■□□□□ 0.72
Efnb3O35393 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Efnb3O35393 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.55■□□□□ 0.72
Efnb3O35393 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Efnb3O35393 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.55■□□□□ 0.72
Efnb3O35393 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Efnb3O35393 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
Efnb3O35393 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Efnb3O35393 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Efnb3O35393 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Efnb3O35393 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Efnb3O35393 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Efnb3O35393 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.52■□□□□ 0.71
Efnb3O35393 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Efnb3O35393 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Efnb3O35393 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Efnb3O35393 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Efnb3O35393 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Efnb3O35393 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Efnb3O35393 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.49■□□□□ 0.71
Efnb3O35393 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Efnb3O35393 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Efnb3O35393 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms