Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.09■■■□□ 2.57
Gm4340L7N2C4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Gm4340L7N2C4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Gm4340L7N2C4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Gm4340L7N2C4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.07■■■□□ 2.56
Gm4340L7N2C4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.07■■■□□ 2.56
Gm4340L7N2C4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.07■■■□□ 2.56
Gm4340L7N2C4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Gm4340L7N2C4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Gm4340L7N2C4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.05■■■□□ 2.56
Gm4340L7N2C4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Gm4340L7N2C4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Gm4340L7N2C4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
Gm4340L7N2C4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Gm4340L7N2C4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Gm4340L7N2C4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.01■■■□□ 2.55
Gm4340L7N2C4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Gm4340L7N2C4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Gm4340L7N2C4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Gm4340L7N2C4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Gm4340L7N2C4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Gm4340L7N2C4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
Gm4340L7N2C4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31■■■□□ 2.55
Gm4340L7N2C4 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.99■■■□□ 2.55
Gm4340L7N2C4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Gm4340L7N2C4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Gm4340L7N2C4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.98■■■□□ 2.55
Gm4340L7N2C4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Gm4340L7N2C4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Gm4340L7N2C4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Gm4340L7N2C4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
Gm4340L7N2C4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Gm4340L7N2C4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.94■■■□□ 2.54
Gm4340L7N2C4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.94■■■□□ 2.54
Gm4340L7N2C4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.94■■■□□ 2.54
Gm4340L7N2C4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
Gm4340L7N2C4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Gm4340L7N2C4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Gm4340L7N2C4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
Gm4340L7N2C4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.88■■■□□ 2.53
Gm4340L7N2C4 Gm24970-201ENSMUST00000175582 82 ntBASIC30.87■■■□□ 2.53
Gm4340L7N2C4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.87■■■□□ 2.53
Gm4340L7N2C4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Gm4340L7N2C4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
Gm4340L7N2C4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.82■■■□□ 2.53
Gm4340L7N2C4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
Gm4340L7N2C4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Gm4340L7N2C4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Gm4340L7N2C4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Gm4340L7N2C4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Gm4340L7N2C4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Gm4340L7N2C4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Gm4340L7N2C4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Gm4340L7N2C4 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.76■■■□□ 2.51
Gm4340L7N2C4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Gm4340L7N2C4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Gm4340L7N2C4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Gm4340L7N2C4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.73■■■□□ 2.51
Gm4340L7N2C4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Gm4340L7N2C4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Gm4340L7N2C4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Gm4340L7N2C4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Gm4340L7N2C4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Gm4340L7N2C4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.7■■■□□ 2.5
Gm4340L7N2C4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Gm4340L7N2C4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Gm4340L7N2C4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.69■■■□□ 2.5
Gm4340L7N2C4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Gm4340L7N2C4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Gm4340L7N2C4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Gm4340L7N2C4 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.66■■■□□ 2.5
Gm4340L7N2C4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Gm4340L7N2C4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
Gm4340L7N2C4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Gm4340L7N2C4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Gm4340L7N2C4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Gm4340L7N2C4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Gm4340L7N2C4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
Gm4340L7N2C4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Gm4340L7N2C4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.57■■■□□ 2.48
Gm4340L7N2C4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Gm4340L7N2C4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Gm4340L7N2C4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Gm4340L7N2C4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.52■■■□□ 2.48
Gm4340L7N2C4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Gm4340L7N2C4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Gm4340L7N2C4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Gm4340L7N2C4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
Gm4340L7N2C4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gm4340L7N2C4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.48■■■□□ 2.47
Gm4340L7N2C4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Gm4340L7N2C4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Gm4340L7N2C4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.46■■■□□ 2.47
Gm4340L7N2C4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Gm4340L7N2C4 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.45■■■□□ 2.47
Gm4340L7N2C4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Gm4340L7N2C4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gm4340L7N2C4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gm4340L7N2C4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Gm4340L7N2C4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms